Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6689 and GFF6690 are separated by 202 nucleotides
GFF6689 - LSU ribosomal maturation GTPase RbgA (B. subtilis YlqF), at 65,431 to 66,393
GFF6689
GFF6690 - hypothetical protein, at 66,596 to 67,204
GFF6690
Position (kb) 66
67
68 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 66.397 kb on + strand at 66.397 kb on + strand at 66.398 kb on - strand at 66.506 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.521 kb on + strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.522 kb on - strand at 66.704 kb on + strand, within GFF6690 at 66.705 kb on - strand, within GFF6690 at 66.705 kb on - strand, within GFF6690 at 66.705 kb on - strand, within GFF6690 at 66.728 kb on + strand, within GFF6690 at 66.728 kb on + strand, within GFF6690 at 66.728 kb on + strand, within GFF6690 at 66.728 kb on + strand, within GFF6690 at 66.729 kb on - strand, within GFF6690 at 66.729 kb on - strand, within GFF6690 at 66.729 kb on - strand, within GFF6690 at 66.729 kb on - strand, within GFF6690 at 66.755 kb on + strand, within GFF6690 at 66.755 kb on + strand, within GFF6690 at 66.756 kb on - strand, within GFF6690 at 66.756 kb on - strand, within GFF6690 at 66.756 kb on - strand, within GFF6690 at 66.756 kb on - strand, within GFF6690 at 66.756 kb on - strand, within GFF6690 at 66.813 kb on - strand, within GFF6690 at 66.813 kb on - strand, within GFF6690 at 66.813 kb on - strand, within GFF6690 at 66.813 kb on - strand, within GFF6690 at 66.813 kb on - strand, within GFF6690 at 66.872 kb on + strand, within GFF6690 at 66.872 kb on + strand, within GFF6690 at 66.872 kb on + strand, within GFF6690 at 66.872 kb on + strand, within GFF6690 at 66.872 kb on + strand, within GFF6690 at 66.872 kb on + strand, within GFF6690 at 66.872 kb on + strand, within GFF6690 at 66.872 kb on + strand, within GFF6690 at 66.873 kb on - strand, within GFF6690 at 66.873 kb on - strand, within GFF6690 at 66.873 kb on - strand, within GFF6690 at 66.873 kb on - strand, within GFF6690 at 66.873 kb on - strand, within GFF6690 at 66.873 kb on - strand, within GFF6690 at 66.911 kb on + strand, within GFF6690 at 66.911 kb on + strand, within GFF6690 at 66.911 kb on + strand, within GFF6690 at 66.911 kb on + strand, within GFF6690 at 66.911 kb on + strand, within GFF6690 at 66.911 kb on + strand, within GFF6690 at 66.911 kb on + strand, within GFF6690 at 66.911 kb on + strand, within GFF6690 at 66.912 kb on - strand, within GFF6690 at 67.083 kb on - strand, within GFF6690 at 67.325 kb on + strand at 67.325 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.362 kb on + strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.363 kb on - strand at 67.369 kb on + strand at 67.369 kb on + strand at 67.369 kb on + strand at 67.370 kb on - strand at 67.370 kb on - strand at 67.449 kb on + strand at 67.450 kb on - strand at 67.450 kb on - strand at 67.450 kb on - strand at 67.512 kb on + strand at 67.512 kb on + strand at 67.512 kb on + strand at 67.512 kb on + strand at 67.512 kb on + strand at 67.512 kb on + strand at 67.512 kb on + strand at 67.512 kb on + strand at 67.512 kb on + strand at 67.513 kb on - strand at 67.513 kb on - strand at 67.517 kb on + strand at 67.517 kb on + strand at 67.517 kb on + strand at 67.518 kb on - strand at 67.518 kb on - strand at 67.518 kb on - strand at 67.518 kb on - strand at 67.518 kb on - strand at 67.518 kb on - strand at 67.518 kb on - strand at 67.549 kb on + strand at 67.549 kb on + strand at 67.550 kb on - strand at 67.550 kb on - strand at 67.550 kb on - strand at 67.550 kb on - strand at 67.550 kb on - strand at 67.550 kb on - strand at 67.554 kb on - strand at 67.554 kb on - strand at 67.554 kb on - strand at 67.554 kb on - strand at 67.570 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 66,397 + +0.1 66,397 + -1.2 66,398 - -1.1 66,506 + +0.3 66,521 + -1.8 66,521 + -2.6 66,521 + +0.1 66,521 + -0.2 66,521 + -1.5 66,521 + +0.3 66,521 + +1.8 66,521 + +0.3 66,521 + -0.7 66,521 + -0.4 66,521 + +0.2 66,521 + +0.7 66,521 + +0.1 66,522 - +0.4 66,522 - -1.9 66,522 - -0.3 66,522 - +0.6 66,522 - -0.0 66,522 - -1.7 66,522 - -0.7 66,522 - -0.5 66,522 - -0.4 66,522 - -1.6 66,522 - -1.1 66,522 - +1.0 66,522 - -3.2 66,522 - +1.6 66,522 - -1.4 66,522 - +0.1 66,522 - +0.6 66,704 + GFF6690 0.18 -1.4 66,705 - GFF6690 0.18 +0.6 66,705 - GFF6690 0.18 -0.7 66,705 - GFF6690 0.18 -2.1 66,728 + GFF6690 0.22 +0.7 66,728 + GFF6690 0.22 -1.1 66,728 + GFF6690 0.22 -1.4 66,728 + GFF6690 0.22 -0.4 66,729 - GFF6690 0.22 -0.1 66,729 - GFF6690 0.22 +3.0 66,729 - GFF6690 0.22 +0.2 66,729 - GFF6690 0.22 -1.2 66,755 + GFF6690 0.26 +0.6 66,755 + GFF6690 0.26 -0.7 66,756 - GFF6690 0.26 -3.5 66,756 - GFF6690 0.26 +0.7 66,756 - GFF6690 0.26 -0.4 66,756 - GFF6690 0.26 -0.7 66,756 - GFF6690 0.26 -2.6 66,813 - GFF6690 0.36 -2.9 66,813 - GFF6690 0.36 -1.5 66,813 - GFF6690 0.36 -1.7 66,813 - GFF6690 0.36 -2.1 66,813 - GFF6690 0.36 -0.5 66,872 + GFF6690 0.45 -1.2 66,872 + GFF6690 0.45 -1.0 66,872 + GFF6690 0.45 -0.9 66,872 + GFF6690 0.45 +0.3 66,872 + GFF6690 0.45 +2.2 66,872 + GFF6690 0.45 -1.8 66,872 + GFF6690 0.45 -0.9 66,872 + GFF6690 0.45 -0.7 66,873 - GFF6690 0.45 -2.1 66,873 - GFF6690 0.45 -0.4 66,873 - GFF6690 0.45 -2.4 66,873 - GFF6690 0.45 -2.3 66,873 - GFF6690 0.45 +0.8 66,873 - GFF6690 0.45 -2.3 66,911 + GFF6690 0.52 +0.9 66,911 + GFF6690 0.52 -2.3 66,911 + GFF6690 0.52 -1.9 66,911 + GFF6690 0.52 -0.7 66,911 + GFF6690 0.52 -1.2 66,911 + GFF6690 0.52 +1.1 66,911 + GFF6690 0.52 -4.4 66,911 + GFF6690 0.52 -1.7 66,912 - GFF6690 0.52 -2.8 67,083 - GFF6690 0.80 -2.6 67,325 + -0.3 67,325 + -2.4 67,362 + +0.4 67,362 + +0.4 67,362 + -0.7 67,362 + -1.4 67,362 + +1.1 67,362 + -2.4 67,362 + +0.6 67,362 + -3.4 67,362 + -4.0 67,362 + -0.8 67,362 + -0.2 67,363 - +0.7 67,363 - -0.8 67,363 - -0.4 67,363 - -1.2 67,363 - -3.4 67,363 - +1.4 67,363 - -1.2 67,363 - -0.7 67,363 - +1.9 67,363 - -1.4 67,369 + -1.8 67,369 + -1.4 67,369 + -1.9 67,370 - +0.6 67,370 - -1.5 67,449 + +0.8 67,450 - -0.7 67,450 - +0.1 67,450 - -2.7 67,512 + +0.1 67,512 + -1.4 67,512 + -1.9 67,512 + -0.7 67,512 + +1.9 67,512 + -1.5 67,512 + +1.2 67,512 + +2.5 67,512 + -1.7 67,513 - -1.9 67,513 - -1.2 67,517 + +0.4 67,517 + +0.8 67,517 + +1.1 67,518 - +0.6 67,518 - -0.7 67,518 - -0.4 67,518 - -1.2 67,518 - -0.7 67,518 - +1.2 67,518 - -0.5 67,549 + -2.5 67,549 + -1.5 67,550 - +1.6 67,550 - -1.5 67,550 - -1.0 67,550 - +0.9 67,550 - -0.2 67,550 - -1.2 67,554 - -1.4 67,554 - -2.9 67,554 - +0.4 67,554 - +0.3 67,570 - -3.0
Or see this region's nucleotide sequence