Strain Fitness in Variovorax sp. SCN45 around GFF6512

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
6,832	+				-0.1
6,832	+				+0.1
6,833	-				-0.3
6,919	+				-0.0
6,919	+				+1.9
6,919	+				-0.7
6,919	+				+1.4
6,920	-				+1.6
6,920	-				-2.0
6,920	-				+0.1
6,920	-				-0.9
6,920	-				-2.9
6,920	-				-0.4
6,965	-				+0.2
7,097	+		GFF6511	0.16	-0.2
7,097	+		GFF6511	0.16	-0.9
7,097	+		GFF6511	0.16	-1.9
7,098	-		GFF6511	0.16	+0.1
7,098	-		GFF6511	0.16	+0.5
7,098	-		GFF6511	0.16	+0.6
7,098	-		GFF6511	0.16	+2.1
7,205	+		GFF6511	0.31	-2.1
7,205	+		GFF6511	0.31	-0.3
7,205	+		GFF6511	0.31	+1.9
7,205	+		GFF6511	0.31	+0.8
7,205	+		GFF6511	0.31	-1.9
7,206	-		GFF6511	0.31	+0.7
7,206	-		GFF6511	0.31	-0.5
7,206	-		GFF6511	0.31	-1.1
7,226	+		GFF6511	0.33	-1.6
7,226	+		GFF6511	0.33	-1.0
7,226	+		GFF6511	0.33	-0.1
7,226	+		GFF6511	0.33	-0.9
7,227	-		GFF6511	0.34	+1.1
7,227	-		GFF6511	0.34	+0.9
7,966	+		GFF6512	0.40	-0.9
7,967	-		GFF6512	0.40	-3.0
7,967	-		GFF6512	0.40	-2.7
7,967	-		GFF6512	0.40	-0.6
8,370	+				+1.7
8,371	-				-2.4
8,769	+		GFF6513	0.14	-0.2
8,770	-		GFF6513	0.14	-3.1
9,122	+		GFF6513	0.33	-0.9
9,123	-		GFF6513	0.34	-0.7
9,317	-		GFF6513	0.44	-4.2
9,317	-		GFF6513	0.44	-2.9