Strain Fitness in Variovorax sp. SCN45 around GFF6182

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
86,826	-		GFF6181	0.34	-1.6
87,468	+				-1.4
87,469	-				-0.1
87,469	-				-1.1
87,546	+				-0.9
87,546	+				-0.4
87,546	+				+0.9
87,546	+				-2.1
87,547	-		GFF6182	0.10	-0.9
87,547	-		GFF6182	0.10	+0.9
87,547	-		GFF6182	0.10	+0.3
87,547	-		GFF6182	0.10	+0.9
87,547	-		GFF6182	0.10	-0.9
87,547	-		GFF6182	0.10	+1.9
87,547	-		GFF6182	0.10	-0.7
87,552	+		GFF6182	0.10	-0.7
87,552	+		GFF6182	0.10	-0.7
87,553	-		GFF6182	0.11	-0.4
87,553	-		GFF6182	0.11	+0.3
87,553	-		GFF6182	0.11	-1.7
87,553	-		GFF6182	0.11	-0.4
87,553	-		GFF6182	0.11	-1.8
87,553	-		GFF6182	0.11	-0.4
87,556	-		GFF6182	0.11	-1.1
87,556	-		GFF6182	0.11	-0.4
87,556	-		GFF6182	0.11	-0.1
87,782	+		GFF6182	0.31	-1.1
87,782	+		GFF6182	0.31	-0.7
88,031	+		GFF6182	0.53	+0.9
88,031	+		GFF6182	0.53	-1.1
88,031	+		GFF6182	0.53	-0.7
88,589	+				-1.1
88,589	+				+1.7
88,590	-				-1.1
88,590	-				+0.9