Strain Fitness in Variovorax sp. SCN45 around GFF6109

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
7,450	+		GFF6107	0.78	-1.9
7,450	+		GFF6107	0.78	-5.1
7,450	+		GFF6107	0.78	-1.1
7,451	-		GFF6107	0.78	-3.7
7,722	+				-2.8
7,723	-				-3.2
8,153	+		GFF6109	0.27	+2.5
8,154	-		GFF6109	0.27	-0.6
8,154	-		GFF6109	0.27	+1.8
8,154	-		GFF6109	0.27	-0.7
8,267	+		GFF6109	0.48	-1.9
8,267	+		GFF6109	0.48	+1.6
8,267	+		GFF6109	0.48	-2.4
8,267	+		GFF6109	0.48	-0.9
8,267	+		GFF6109	0.48	+0.4
8,267	+		GFF6109	0.48	-0.9
8,268	-		GFF6109	0.48	-0.9
8,268	-		GFF6109	0.48	+0.4
8,418	+		GFF6109	0.76	+1.4
8,419	-		GFF6109	0.76	-1.4
8,419	-		GFF6109	0.76	-3.0
8,546	+				+0.4
8,547	-				+1.3
8,547	-				+3.2
8,704	-				-2.2
8,866	-		GFF6110	0.20	-0.4
8,866	-		GFF6110	0.20	+1.7
9,000	+		GFF6110	0.29	+0.5
9,000	+		GFF6110	0.29	+0.7
9,000	+		GFF6110	0.29	-0.4
9,000	+		GFF6110	0.29	+0.1
9,001	-		GFF6110	0.29	-1.3
9,177	+		GFF6110	0.41	-0.1
9,177	+		GFF6110	0.41	+2.1
9,177	+		GFF6110	0.41	+1.6
9,177	+		GFF6110	0.41	-2.4
9,178	-		GFF6110	0.42	-1.0
9,178	-		GFF6110	0.42	-1.3
9,178	-		GFF6110	0.42	-1.3
9,178	-		GFF6110	0.42	-1.9
9,178	-		GFF6110	0.42	+0.0
9,184	-		GFF6110	0.42	+0.4
9,381	+		GFF6110	0.55	+0.3
9,382	-		GFF6110	0.55	+0.8
9,382	-		GFF6110	0.55	-1.9
9,382	-		GFF6110	0.55	-0.4
9,382	-		GFF6110	0.55	-0.1
9,382	-		GFF6110	0.55	-1.3
9,457	-		GFF6110	0.61	-0.1