Strain Fitness in Variovorax sp. SCN45 around GFF485

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
523,455	+				-1.9
523,455	+				-2.2
523,455	+				-0.4
523,456	-				+1.2
523,456	-				-1.9
523,456	-				-0.7
523,456	-				+0.6
523,607	+				-4.1
524,791	+		GFF485	0.48	+1.2
524,791	+		GFF485	0.48	+1.1
524,791	+		GFF485	0.48	+2.2
524,791	+		GFF485	0.48	+0.9
524,791	+		GFF485	0.48	+3.6
524,792	-		GFF485	0.48	-0.6
524,792	-		GFF485	0.48	+1.6
524,792	-		GFF485	0.48	+2.3
524,792	-		GFF485	0.48	-1.9
524,792	-		GFF485	0.48	-0.5
524,792	-		GFF485	0.48	-3.0
524,890	+		GFF485	0.60	+2.0
524,890	+		GFF485	0.60	-1.3
524,890	+		GFF485	0.60	-0.7
524,890	+		GFF485	0.60	+0.5
524,890	+		GFF485	0.60	+0.1
524,890	+		GFF485	0.60	+0.2
524,890	+		GFF485	0.60	+1.9
524,890	+		GFF485	0.60	+0.4
524,890	+		GFF485	0.60	-2.1
524,890	+		GFF485	0.60	+1.5
524,891	-		GFF485	0.60	+0.0
524,891	-		GFF485	0.60	-2.7
524,891	-		GFF485	0.60	-0.1
524,891	-		GFF485	0.60	-2.4
524,891	-		GFF485	0.60	-2.9
525,148	+				-0.2
525,148	+				-2.7
525,148	+				-1.3
525,148	+				-0.7
525,148	+				+0.6
525,149	-				-1.2
525,149	-				-1.5
525,149	-				+3.3
525,149	-				+1.6
525,431	+		GFF486	0.31	-2.0
525,431	+		GFF486	0.31	-3.2
525,432	-		GFF486	0.31	-3.1
525,432	-		GFF486	0.31	-1.9
525,432	-		GFF486	0.31	-3.1
525,564	+		GFF486	0.52	+0.1
525,564	+		GFF486	0.52	+3.8
525,564	+		GFF486	0.52	+1.8
525,565	-		GFF486	0.52	-1.6
525,723	+		GFF486	0.76	-1.9
525,723	+		GFF486	0.76	+0.4
525,723	+		GFF486	0.76	-0.0
525,723	+		GFF486	0.76	-0.6
525,723	+		GFF486	0.76	+1.8
525,723	+		GFF486	0.76	-2.1
525,723	+		GFF486	0.76	+0.6
525,724	-		GFF486	0.76	+0.5
525,724	-		GFF486	0.76	+0.0
525,724	-		GFF486	0.76	+1.3
525,724	-		GFF486	0.76	-1.2
525,724	-		GFF486	0.76	+0.5
525,724	-		GFF486	0.76	-0.4
525,724	-		GFF486	0.76	-1.0
525,724	-		GFF486	0.76	+1.4
525,765	+		GFF486	0.83	-3.7
525,766	-		GFF486	0.83	+0.8
525,766	-		GFF486	0.83	-3.1
525,766	-		GFF486	0.83	-0.4
525,766	-		GFF486	0.83	-3.6
525,864	+				-0.1
525,864	+				+1.6
525,864	+				-1.6
525,864	+				-1.2
525,864	+				-1.0
525,864	+				+0.5
525,864	+				-1.5
525,864	+				-2.3
525,865	-				-1.6
525,865	-				+0.0
525,865	-				-0.3
525,865	-				+0.1
525,889	+				-0.1
525,889	+				-1.0
525,889	+				-0.7
525,889	+				-1.3
525,889	+				-3.1
525,890	-				+0.3
525,890	-				+1.0
525,890	-				-3.5
525,890	-				+0.0
525,890	-				+0.6
525,890	-				-1.6
526,008	-				-0.7
526,116	-				-0.4