Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4625 and GFF4626 are separated by 45 nucleotides GFF4626 and GFF4627 are separated by 0 nucleotides GFF4627 and GFF4629 overlap by 1 nucleotides
GFF4625 - Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33), at 266,896 to 267,993
GFF4625
GFF4626 - dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL, at 268,039 to 268,800
GFF4626
GFF4627 - Glycosyltransferase, at 268,801 to 269,784
GFF4627
GFF4629 - Glycosyl transferase, group 2 family, at 269,784 to 271,535
GFF4629
Position (kb) 268
269 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 267.053 kb on + strand, within GFF4625 at 267.054 kb on - strand, within GFF4625 at 267.054 kb on - strand, within GFF4625 at 267.197 kb on + strand, within GFF4625 at 267.198 kb on - strand, within GFF4625 at 267.198 kb on - strand, within GFF4625 at 267.198 kb on - strand, within GFF4625 at 267.228 kb on - strand, within GFF4625 at 267.320 kb on + strand, within GFF4625 at 267.320 kb on + strand, within GFF4625 at 267.321 kb on - strand, within GFF4625 at 267.321 kb on - strand, within GFF4625 at 267.359 kb on + strand, within GFF4625 at 267.360 kb on - strand, within GFF4625 at 267.497 kb on + strand, within GFF4625 at 267.905 kb on + strand at 267.906 kb on - strand at 268.014 kb on + strand at 268.015 kb on - strand at 268.015 kb on - strand at 268.015 kb on - strand at 268.015 kb on - strand at 268.015 kb on - strand at 268.015 kb on - strand at 268.034 kb on - strand at 268.486 kb on + strand, within GFF4626 at 268.486 kb on + strand, within GFF4626 at 268.487 kb on - strand, within GFF4626 at 268.588 kb on + strand, within GFF4626 at 268.589 kb on - strand, within GFF4626 at 268.589 kb on - strand, within GFF4626 at 268.705 kb on + strand, within GFF4626 at 268.705 kb on + strand, within GFF4626 at 268.706 kb on - strand, within GFF4626 at 268.706 kb on - strand, within GFF4626 at 268.711 kb on + strand, within GFF4626 at 268.711 kb on + strand, within GFF4626 at 268.711 kb on + strand, within GFF4626 at 268.712 kb on - strand, within GFF4626 at 268.712 kb on - strand, within GFF4626 at 268.712 kb on - strand, within GFF4626
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 267,053 + GFF4625 0.14 +2.1 267,054 - GFF4625 0.14 +2.6 267,054 - GFF4625 0.14 -1.1 267,197 + GFF4625 0.27 -4.4 267,198 - GFF4625 0.28 -3.3 267,198 - GFF4625 0.28 -2.8 267,198 - GFF4625 0.28 +1.1 267,228 - GFF4625 0.30 -0.5 267,320 + GFF4625 0.39 +1.2 267,320 + GFF4625 0.39 -0.9 267,321 - GFF4625 0.39 -1.1 267,321 - GFF4625 0.39 +0.5 267,359 + GFF4625 0.42 -3.7 267,360 - GFF4625 0.42 -1.7 267,497 + GFF4625 0.55 -1.5 267,905 + -0.7 267,906 - -2.8 268,014 + -2.1 268,015 - -2.6 268,015 - -1.1 268,015 - -3.1 268,015 - -0.5 268,015 - -0.5 268,015 - -1.3 268,034 - +0.5 268,486 + GFF4626 0.59 +0.1 268,486 + GFF4626 0.59 -0.7 268,487 - GFF4626 0.59 -0.2 268,588 + GFF4626 0.72 -3.4 268,589 - GFF4626 0.72 -2.8 268,589 - GFF4626 0.72 -3.1 268,705 + GFF4626 0.87 +0.5 268,705 + GFF4626 0.87 +1.1 268,706 - GFF4626 0.88 -3.0 268,706 - GFF4626 0.88 +0.1 268,711 + GFF4626 0.88 -0.2 268,711 + GFF4626 0.88 -1.5 268,711 + GFF4626 0.88 -1.7 268,712 - GFF4626 0.88 -1.4 268,712 - GFF4626 0.88 -1.6 268,712 - GFF4626 0.88 -3.4
Or see this region's nucleotide sequence