Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF430 and GFF431 are separated by 148 nucleotides GFF431 and GFF432 are separated by 181 nucleotides
GFF430 - RND efflux system, membrane fusion protein, at 468,399 to 469,649
GFF430
GFF431 - Esterase/lipase, at 469,798 to 470,694
GFF431
GFF432 - Probable transcription regulator protein of MDR efflux pump cluster, at 470,876 to 471,790
GFF432
Position (kb) 469
470
471 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 468.964 kb on + strand, within GFF430 at 468.964 kb on + strand, within GFF430 at 468.964 kb on + strand, within GFF430 at 468.964 kb on + strand, within GFF430 at 468.964 kb on + strand, within GFF430 at 468.964 kb on + strand, within GFF430 at 468.964 kb on + strand, within GFF430 at 468.964 kb on + strand, within GFF430 at 468.965 kb on - strand, within GFF430 at 468.965 kb on - strand, within GFF430 at 468.965 kb on - strand, within GFF430 at 468.965 kb on - strand, within GFF430 at 468.965 kb on - strand, within GFF430 at 469.088 kb on - strand, within GFF430 at 469.088 kb on - strand, within GFF430 at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.540 kb on + strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.541 kb on - strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.799 kb on + strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.800 kb on - strand at 469.923 kb on - strand, within GFF431 at 469.923 kb on - strand, within GFF431 at 470.325 kb on - strand, within GFF431 at 470.367 kb on - strand, within GFF431 at 470.531 kb on - strand, within GFF431 at 470.576 kb on + strand, within GFF431 at 470.728 kb on + strand at 470.729 kb on - strand at 470.729 kb on - strand at 470.729 kb on - strand at 470.729 kb on - strand at 470.729 kb on - strand at 470.730 kb on + strand at 470.730 kb on + strand at 470.738 kb on + strand at 470.738 kb on + strand at 470.739 kb on - strand at 470.739 kb on - strand at 470.739 kb on - strand at 470.739 kb on - strand at 470.739 kb on - strand at 471.068 kb on + strand, within GFF432 at 471.068 kb on + strand, within GFF432 at 471.068 kb on + strand, within GFF432 at 471.068 kb on + strand, within GFF432 at 471.069 kb on - strand, within GFF432 at 471.069 kb on - strand, within GFF432 at 471.386 kb on + strand, within GFF432 at 471.386 kb on + strand, within GFF432 at 471.386 kb on + strand, within GFF432 at 471.386 kb on + strand, within GFF432 at 471.387 kb on - strand, within GFF432 at 471.387 kb on - strand, within GFF432 at 471.387 kb on - strand, within GFF432 at 471.399 kb on - strand, within GFF432 at 471.399 kb on - strand, within GFF432 at 471.452 kb on + strand, within GFF432 at 471.452 kb on + strand, within GFF432 at 471.452 kb on + strand, within GFF432 at 471.452 kb on + strand, within GFF432 at 471.452 kb on + strand, within GFF432 at 471.452 kb on + strand, within GFF432 at 471.453 kb on - strand, within GFF432 at 471.453 kb on - strand, within GFF432 at 471.453 kb on - strand, within GFF432 at 471.453 kb on - strand, within GFF432 at 471.453 kb on - strand, within GFF432 at 471.453 kb on - strand, within GFF432 at 471.453 kb on - strand, within GFF432 at 471.453 kb on - strand, within GFF432 at 471.480 kb on - strand, within GFF432 at 471.531 kb on - strand, within GFF432
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 468,964 + GFF430 0.45 -2.9 468,964 + GFF430 0.45 +0.9 468,964 + GFF430 0.45 -1.5 468,964 + GFF430 0.45 +1.0 468,964 + GFF430 0.45 -1.2 468,964 + GFF430 0.45 +1.8 468,964 + GFF430 0.45 -0.7 468,964 + GFF430 0.45 -0.8 468,965 - GFF430 0.45 -3.3 468,965 - GFF430 0.45 -1.1 468,965 - GFF430 0.45 -2.2 468,965 - GFF430 0.45 -0.4 468,965 - GFF430 0.45 -0.4 469,088 - GFF430 0.55 -0.2 469,088 - GFF430 0.55 +2.5 469,540 + -1.5 469,540 + +0.4 469,540 + -0.0 469,540 + -1.2 469,540 + +1.9 469,540 + +0.3 469,540 + -0.9 469,540 + +0.7 469,540 + -0.4 469,540 + -0.4 469,540 + -2.5 469,540 + -3.4 469,540 + -2.1 469,540 + -1.2 469,540 + -3.7 469,540 + +0.1 469,541 - -1.2 469,541 - -1.5 469,541 - -1.2 469,541 - -0.2 469,541 - +0.7 469,541 - -0.5 469,541 - -2.3 469,541 - -2.1 469,541 - -0.8 469,541 - -0.7 469,541 - +0.6 469,541 - -2.1 469,541 - +0.2 469,541 - -1.5 469,541 - +2.3 469,541 - +2.0 469,541 - -2.4 469,541 - +1.4 469,541 - +0.7 469,541 - +0.6 469,799 + +1.8 469,799 + +0.6 469,799 + -2.4 469,799 + -1.8 469,799 + -0.7 469,799 + +1.2 469,799 + -0.0 469,799 + +1.4 469,799 + +0.6 469,799 + +2.1 469,799 + +1.2 469,799 + +2.7 469,799 + -0.0 469,800 - -0.1 469,800 - +1.8 469,800 - +1.2 469,800 - -0.0 469,800 - +1.9 469,800 - -2.5 469,800 - -2.1 469,800 - -0.8 469,800 - -1.1 469,800 - -0.4 469,800 - +0.1 469,800 - -2.8 469,800 - -0.4 469,800 - -2.8 469,800 - +0.9 469,800 - -3.0 469,800 - -1.4 469,800 - -1.9 469,800 - -0.2 469,800 - +0.8 469,923 - GFF431 0.14 -1.5 469,923 - GFF431 0.14 +0.1 470,325 - GFF431 0.59 +0.1 470,367 - GFF431 0.63 -1.4 470,531 - GFF431 0.82 -0.9 470,576 + GFF431 0.87 -0.5 470,728 + -3.5 470,729 - -1.7 470,729 - -0.1 470,729 - +2.4 470,729 - -3.2 470,729 - -2.1 470,730 + -0.9 470,730 + -0.4 470,738 + +0.6 470,738 + +1.6 470,739 - +0.6 470,739 - +1.1 470,739 - -0.0 470,739 - -1.3 470,739 - -1.1 471,068 + GFF432 0.21 +0.8 471,068 + GFF432 0.21 -2.9 471,068 + GFF432 0.21 -3.2 471,068 + GFF432 0.21 +2.6 471,069 - GFF432 0.21 -0.6 471,069 - GFF432 0.21 +1.6 471,386 + GFF432 0.56 +0.6 471,386 + GFF432 0.56 -2.7 471,386 + GFF432 0.56 -3.8 471,386 + GFF432 0.56 -1.5 471,387 - GFF432 0.56 +0.1 471,387 - GFF432 0.56 -1.5 471,387 - GFF432 0.56 +1.0 471,399 - GFF432 0.57 -1.8 471,399 - GFF432 0.57 -1.4 471,452 + GFF432 0.63 -1.8 471,452 + GFF432 0.63 +1.9 471,452 + GFF432 0.63 +0.6 471,452 + GFF432 0.63 -1.5 471,452 + GFF432 0.63 -1.5 471,452 + GFF432 0.63 -0.9 471,453 - GFF432 0.63 +0.3 471,453 - GFF432 0.63 -0.9 471,453 - GFF432 0.63 +0.7 471,453 - GFF432 0.63 -0.5 471,453 - GFF432 0.63 +0.3 471,453 - GFF432 0.63 +0.4 471,453 - GFF432 0.63 +1.1 471,453 - GFF432 0.63 -0.4 471,480 - GFF432 0.66 +0.6 471,531 - GFF432 0.72 +2.3
Or see this region's nucleotide sequence