Strain Fitness in Variovorax sp. SCN45 around GFF4190

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
104,573	-		GFF4188	0.83	+1.6
104,573	-		GFF4188	0.83	+0.5
104,573	-		GFF4188	0.83	-2.3
104,621	+		GFF4188	0.90	-0.2
104,622	-				-2.6
104,721	-				+0.2
104,721	-				-1.5
104,721	-				-5.0
104,792	-				-1.6
104,973	+		GFF4189	0.49	+0.6
104,973	+		GFF4189	0.49	-1.5
104,973	+		GFF4189	0.49	-0.0
104,974	-		GFF4189	0.49	+0.4
104,974	-		GFF4189	0.49	-0.9
104,974	-		GFF4189	0.49	-2.6
105,018	+		GFF4189	0.60	+1.0
105,473	+		GFF4190	0.31	+1.7
105,764	+		GFF4190	0.71	+0.0
105,765	-		GFF4190	0.71	-0.4
105,765	-		GFF4190	0.71	-2.7
105,795	+		GFF4190	0.75	-1.7
105,846	-		GFF4190	0.82	+5.5
105,848	+		GFF4190	0.83	+1.3
105,848	+		GFF4190	0.83	-2.7
105,849	-		GFF4190	0.83	+1.7
106,047	+				+0.5
106,216	-		GFF4191	0.13	-0.9
106,386	+		GFF4191	0.31	-1.3
106,387	-		GFF4191	0.31	-1.0
106,444	-		GFF4191	0.37	+1.0
106,510	-		GFF4191	0.44	-1.7
106,621	+		GFF4191	0.55	-0.4
106,621	+		GFF4191	0.55	+0.8
106,621	+		GFF4191	0.55	-2.6
106,622	-		GFF4191	0.55	+0.5
106,803	+		GFF4191	0.74	+1.4
106,803	+		GFF4191	0.74	+1.3