Strain Fitness in Variovorax sp. SCN45 around GFF4128

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
30,736	-		GFF4127	0.19	-0.6
30,864	+		GFF4127	0.30	-0.4
31,076	-		GFF4127	0.50	-1.4
31,755	+				-1.1
31,755	+				-1.2
31,755	+				-1.0
31,756	-				+1.0
31,756	-				-0.4
31,896	+		GFF4128	0.14	-0.0
31,897	-		GFF4128	0.14	-2.9
31,948	-		GFF4128	0.17	-0.9
31,948	-		GFF4128	0.17	-0.7
32,041	-		GFF4128	0.23	-1.4
32,041	-		GFF4128	0.23	-0.0
32,041	-		GFF4128	0.23	-3.6
32,262	+		GFF4128	0.37	-1.4
32,263	-		GFF4128	0.37	+0.4
32,263	-		GFF4128	0.37	-0.6
32,317	-		GFF4128	0.40	-1.7
32,428	+		GFF4128	0.47	-1.9
32,436	+		GFF4128	0.47	-0.4
32,437	-		GFF4128	0.47	-2.0
32,601	+		GFF4128	0.57	-1.5
32,601	+		GFF4128	0.57	-2.1
32,640	+		GFF4128	0.60	-1.5
32,641	-		GFF4128	0.60	-0.4
32,740	-		GFF4128	0.66	+1.0
32,829	+		GFF4128	0.71	-0.5
32,829	+		GFF4128	0.71	-2.6
32,830	-		GFF4128	0.71	-3.1
32,889	+		GFF4128	0.75	+1.8
33,052	-		GFF4128	0.85	+0.6
33,052	-		GFF4128	0.85	+0.8
33,354	+				-2.0
33,354	+				-0.6
33,657	-		GFF4129	0.22	+3.9
33,672	-		GFF4129	0.23	-1.7
33,737	+		GFF4129	0.27	-3.0
33,738	-		GFF4129	0.27	+1.5
34,226	+		GFF4129	0.57	-1.2
34,226	+		GFF4129	0.57	+0.0
34,226	+		GFF4129	0.57	-0.6
34,226	+		GFF4129	0.57	-0.2
34,226	+		GFF4129	0.57	-0.4
34,227	-		GFF4129	0.57	-0.6
34,227	-		GFF4129	0.57	-2.4
34,247	+		GFF4129	0.58	+1.1