Strain Fitness in Variovorax sp. SCN45 around GFF3602

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
114,667	+		GFF3601	0.40	+1.2
114,667	+		GFF3601	0.40	-1.6
114,668	-		GFF3601	0.40	-0.4
114,668	-		GFF3601	0.40	-1.9
114,668	-		GFF3601	0.40	-1.1
114,668	-		GFF3601	0.40	-0.4
114,721	+		GFF3601	0.44	+1.2
114,721	+		GFF3601	0.44	-0.1
114,722	-		GFF3601	0.44	+1.0
114,742	+		GFF3601	0.45	-0.8
114,781	+		GFF3601	0.48	-1.7
114,781	+		GFF3601	0.48	+0.2
114,781	+		GFF3601	0.48	-0.3
114,782	-		GFF3601	0.48	-1.0
114,811	+		GFF3601	0.51	+0.0
114,811	+		GFF3601	0.51	-0.6
114,811	+		GFF3601	0.51	+0.1
114,811	+		GFF3601	0.51	-1.7
114,812	-		GFF3601	0.51	-0.8
114,812	-		GFF3601	0.51	-2.0
114,812	-		GFF3601	0.51	+0.6
114,812	-		GFF3601	0.51	-0.1
114,812	-		GFF3601	0.51	-1.0
114,812	-		GFF3601	0.51	+3.9
114,823	+		GFF3601	0.52	+0.6
114,823	+		GFF3601	0.52	+0.5
114,823	+		GFF3601	0.52	-0.3
114,824	-		GFF3601	0.52	-1.4
114,824	-		GFF3601	0.52	-0.6
114,824	-		GFF3601	0.52	-1.1
114,874	+		GFF3601	0.55	+1.7
114,875	-		GFF3601	0.55	-1.4
114,901	+		GFF3601	0.57	-1.7
114,901	+		GFF3601	0.57	-2.7
114,901	+		GFF3601	0.57	-2.6
114,901	+		GFF3601	0.57	-2.0
114,901	+		GFF3601	0.57	+0.6
114,901	+		GFF3601	0.57	-3.6
114,901	+		GFF3601	0.57	-0.4
114,901	+		GFF3601	0.57	-2.2
114,901	+		GFF3601	0.57	-2.0
114,901	+		GFF3601	0.57	+0.3
114,902	-		GFF3601	0.57	-0.6
114,902	-		GFF3601	0.57	-1.7
114,902	-		GFF3601	0.57	-0.4
114,902	-		GFF3601	0.57	+0.0
114,902	-		GFF3601	0.57	-0.2
114,902	-		GFF3601	0.57	+0.9
114,902	-		GFF3601	0.57	+2.1
114,902	-		GFF3601	0.57	+0.2
114,902	-		GFF3601	0.57	-2.9
114,902	-		GFF3601	0.57	+0.2
114,902	-		GFF3601	0.57	+0.5
114,902	-		GFF3601	0.57	-0.3
114,902	-		GFF3601	0.57	+0.1
115,027	+		GFF3601	0.67	+1.6
115,027	+		GFF3601	0.67	-0.6
115,028	-		GFF3601	0.67	-1.2
115,028	-		GFF3601	0.67	-3.5
115,078	+		GFF3601	0.71	-0.2
115,078	+		GFF3601	0.71	-2.9
115,078	+		GFF3601	0.71	-1.0
115,078	+		GFF3601	0.71	+0.5
115,078	+		GFF3601	0.71	+2.2
115,079	-		GFF3601	0.71	-0.1
115,079	-		GFF3601	0.71	+0.7
115,079	-		GFF3601	0.71	+2.4
115,127	+		GFF3601	0.74	-2.0
115,128	-		GFF3601	0.74	-3.4
115,128	-		GFF3601	0.74	-0.2
115,772	+		GFF3602	0.32	-2.5
115,772	+		GFF3602	0.32	-2.1
115,892	+		GFF3602	0.47	+0.3
116,084	+		GFF3602	0.70	+0.1
116,084	+		GFF3602	0.70	+0.8
116,085	-		GFF3602	0.70	-1.6
116,085	-		GFF3602	0.70	-0.1
116,085	-		GFF3602	0.70	-0.1
116,085	-		GFF3602	0.70	-1.3
116,085	-		GFF3602	0.70	+3.3
116,085	-		GFF3602	0.70	-0.6
116,183	+		GFF3602	0.82	-0.8
116,183	+		GFF3602	0.82	+2.6
116,184	-		GFF3602	0.83	+1.2
116,184	-		GFF3602	0.83	+1.1
116,346	+				+2.1
116,346	+				+1.3
116,347	-				-1.1
116,364	+				+2.7
116,364	+				+0.8
116,365	-				+1.2
116,365	-				-1.0
116,365	-				-2.8
116,365	-				-0.3
116,370	+				+0.1
116,371	-				-0.1
116,418	+				-3.7
116,443	-				+0.8
116,443	-				-0.6
116,443	-				-0.5
116,469	+		GFF3603	0.13	-0.5
116,469	+		GFF3603	0.13	-1.7
116,470	-		GFF3603	0.13	+2.2
116,857	+		GFF3603	0.59	-0.4
116,979	+		GFF3603	0.73	-1.8
116,979	+		GFF3603	0.73	+1.6
116,979	+		GFF3603	0.73	+0.7
116,979	+		GFF3603	0.73	-1.1
116,979	+		GFF3603	0.73	-1.0
116,980	-		GFF3603	0.73	+0.9
116,980	-		GFF3603	0.73	-2.0
116,980	-		GFF3603	0.73	+0.6
116,980	-		GFF3603	0.73	+0.4
116,980	-		GFF3603	0.73	+2.9
116,980	-		GFF3603	0.73	+0.7
116,980	-		GFF3603	0.73	-1.9
116,980	-		GFF3603	0.73	-1.2
117,202	+				+0.7