Strain Fitness in Variovorax sp. SCN45 around GFF3518

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
22,553	+		GFF3516	0.86	+1.2
22,589	+		GFF3516	0.88	-0.8
22,589	+		GFF3516	0.88	-2.1
22,590	-		GFF3516	0.88	-0.2
22,763	+				-1.7
23,048	-		GFF3517	0.31	-3.2
23,100	+		GFF3517	0.40	-1.3
23,100	+		GFF3517	0.40	-1.2
23,488	+				-1.5
23,488	+				-0.4
23,489	-				+1.2
23,575	+		GFF3518	0.25	-3.6
23,575	+		GFF3518	0.25	-1.8
23,575	+		GFF3518	0.25	-1.3
23,575	+		GFF3518	0.25	-2.8
23,575	+		GFF3518	0.25	-0.9
23,576	-		GFF3518	0.25	-3.1
23,576	-		GFF3518	0.25	-1.4
23,747	-		GFF3518	0.71	-1.0
23,975	+				+4.0
23,976	-				+1.0
24,079	+				+0.8
24,080	-				-4.2
24,080	-				+1.7
24,080	-				-1.8