Strain Fitness in Variovorax sp. SCN45 around GFF2638

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
50,606	+		GFF2636	0.89	-2.4
50,704	+				-1.6
50,704	+				+1.7
50,705	-				-0.8
50,705	-				-0.2
51,026	-		GFF2637	0.50	+0.1
51,550	-		GFF2638	0.27	-0.1
51,550	-		GFF2638	0.27	-0.6
51,550	-		GFF2638	0.27	-1.7
51,550	-		GFF2638	0.27	+0.8
52,025	+		GFF2638	0.69	+1.5
52,025	+		GFF2638	0.69	-1.1
52,026	-		GFF2638	0.69	-0.0
52,026	-		GFF2638	0.69	+1.1
52,026	-		GFF2638	0.69	-1.4
52,026	-		GFF2638	0.69	-1.1
52,158	+		GFF2638	0.81	-1.1
52,159	-		GFF2638	0.81	-0.6
52,159	-		GFF2638	0.81	+1.0
52,167	+		GFF2638	0.82	+1.5
52,167	+		GFF2638	0.82	+0.3
52,167	+		GFF2638	0.82	+1.0
52,168	-		GFF2638	0.82	+3.2
52,168	-		GFF2638	0.82	+0.3
52,430	-				+4.0
52,487	+				+0.9
52,488	+				-0.7
52,488	+				-1.9
52,488	+				+0.5
52,488	+				+0.3
52,488	+				-0.4
52,488	+				-1.4
52,489	-				+1.9
52,489	-				-1.6
52,489	-				-0.4
52,489	-				-3.1
52,489	-				+3.0
52,489	-				+1.3
52,489	-				-2.9
52,489	-				-0.8
52,493	+				-2.4
52,494	-				-1.5
52,509	+				+0.5
52,509	+				+1.2
52,510	-				-2.5
52,510	-				-2.4
52,510	-				-0.9
53,072	+		GFF2639	0.19	+2.1
53,072	+		GFF2639	0.19	-2.3
53,072	+		GFF2639	0.19	-0.5
53,073	-		GFF2639	0.19	+0.0
53,073	-		GFF2639	0.19	+2.1
53,102	+		GFF2639	0.20	-2.5
53,102	+		GFF2639	0.20	+1.1
53,102	+		GFF2639	0.20	-0.6
53,103	-		GFF2639	0.20	-0.7
53,103	-		GFF2639	0.20	-0.6
53,103	-		GFF2639	0.20	-0.7
53,106	-		GFF2639	0.20	+3.1