Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2569 and GFF2570 are separated by 72 nucleotides GFF2570 and GFF2571 are separated by 20 nucleotides GFF2571 and GFF2572 are separated by 127 nucleotides GFF2572 and GFF2573 are separated by 24 nucleotides
GFF2569 - Phosphoglycerate mutase (EC 5.4.2.11), at 628,317 to 629,060
GFF2569
GFF2570 - Rhodanese-related sulfurtransferase YibN, at 629,133 to 629,549
GFF2570
GFF2571 - Glutaredoxin 3 (Grx3), at 629,570 to 629,830
GFF2571
GFF2572 - Protein-export protein SecB (maintains pre-export unfolded state), at 629,958 to 630,422
GFF2572
GFF2573 - Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94), at 630,447 to 631,481
GFF2573
Position (kb) 629
630
631 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 629.100 kb on + strand at 629.101 kb on - strand at 629.101 kb on - strand at 629.101 kb on - strand at 629.101 kb on - strand at 629.475 kb on + strand, within GFF2570 at 629.476 kb on - strand, within GFF2570 at 629.476 kb on - strand, within GFF2570 at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.569 kb on + strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.570 kb on - strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.588 kb on + strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.589 kb on - strand at 629.609 kb on + strand, within GFF2571 at 629.662 kb on - strand, within GFF2571 at 629.877 kb on + strand at 629.889 kb on + strand at 629.889 kb on + strand at 629.889 kb on + strand at 629.889 kb on + strand at 629.889 kb on + strand at 629.889 kb on + strand at 629.890 kb on - strand at 629.890 kb on - strand at 629.890 kb on - strand at 630.006 kb on + strand, within GFF2572 at 630.006 kb on + strand, within GFF2572 at 630.006 kb on + strand, within GFF2572 at 630.006 kb on + strand, within GFF2572 at 630.007 kb on - strand, within GFF2572 at 630.007 kb on - strand, within GFF2572 at 630.282 kb on + strand, within GFF2572 at 630.282 kb on + strand, within GFF2572 at 630.282 kb on + strand, within GFF2572 at 630.282 kb on + strand, within GFF2572 at 630.282 kb on + strand, within GFF2572 at 630.282 kb on + strand, within GFF2572 at 630.283 kb on - strand, within GFF2572 at 630.283 kb on - strand, within GFF2572 at 630.283 kb on - strand, within GFF2572 at 630.283 kb on - strand, within GFF2572 at 630.283 kb on - strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.366 kb on + strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.367 kb on - strand, within GFF2572 at 630.420 kb on + strand at 630.420 kb on + strand at 630.420 kb on + strand at 630.420 kb on + strand at 630.420 kb on + strand at 630.421 kb on - strand at 630.421 kb on - strand at 630.421 kb on - strand at 630.421 kb on - strand at 630.421 kb on - strand at 630.421 kb on - strand at 630.421 kb on - strand at 630.585 kb on + strand, within GFF2573 at 630.585 kb on + strand, within GFF2573 at 630.585 kb on + strand, within GFF2573 at 630.586 kb on - strand, within GFF2573 at 630.586 kb on - strand, within GFF2573 at 630.975 kb on + strand, within GFF2573 at 630.975 kb on + strand, within GFF2573 at 630.975 kb on + strand, within GFF2573 at 630.975 kb on + strand, within GFF2573 at 630.975 kb on + strand, within GFF2573 at 630.975 kb on + strand, within GFF2573 at 630.976 kb on - strand, within GFF2573 at 630.976 kb on - strand, within GFF2573 at 630.976 kb on - strand, within GFF2573 at 630.976 kb on - strand, within GFF2573 at 630.976 kb on - strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.299 kb on + strand, within GFF2573 at 631.300 kb on - strand, within GFF2573 at 631.300 kb on - strand, within GFF2573 at 631.300 kb on - strand, within GFF2573 at 631.300 kb on - strand, within GFF2573 at 631.300 kb on - strand, within GFF2573 at 631.300 kb on - strand, within GFF2573 at 631.300 kb on - strand, within GFF2573 at 631.300 kb on - strand, within GFF2573
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 629,100 + +0.9 629,101 - -0.9 629,101 - -1.8 629,101 - +1.0 629,101 - +4.9 629,475 + GFF2570 0.82 +0.0 629,476 - GFF2570 0.82 -0.1 629,476 - GFF2570 0.82 -0.6 629,569 + +0.7 629,569 + +0.4 629,569 + -0.3 629,569 + -0.8 629,569 + -0.3 629,569 + -1.0 629,569 + +0.8 629,569 + -0.8 629,569 + -1.4 629,569 + +0.8 629,569 + -1.1 629,569 + -0.8 629,569 + +2.7 629,569 + -2.2 629,569 + -2.2 629,569 + -1.1 629,569 + +0.2 629,569 + -0.8 629,570 - +1.7 629,570 - +3.5 629,570 - -2.0 629,570 - -0.8 629,570 - -3.0 629,570 - -1.8 629,570 - -1.2 629,570 - +0.5 629,570 - -1.8 629,570 - -0.8 629,570 - +0.5 629,570 - +0.8 629,570 - +0.5 629,570 - +0.4 629,570 - -3.8 629,570 - +0.4 629,588 + +0.2 629,588 + +0.3 629,588 + -0.5 629,588 + +0.0 629,588 + -1.3 629,588 + +0.9 629,588 + -4.3 629,588 + +0.8 629,588 + +1.3 629,588 + -1.4 629,588 + -2.7 629,588 + -2.0 629,588 + -0.4 629,588 + -1.8 629,588 + -0.5 629,588 + -0.5 629,588 + +2.1 629,588 + -1.8 629,588 + -2.3 629,588 + -0.9 629,588 + -0.3 629,588 + -0.5 629,588 + +1.0 629,588 + +3.4 629,588 + +1.9 629,588 + +0.5 629,589 - +0.3 629,589 - -0.5 629,589 - -2.2 629,589 - +0.7 629,589 - -1.5 629,589 - -1.5 629,589 - +0.7 629,589 - -0.3 629,589 - -0.2 629,589 - -1.4 629,589 - +0.1 629,589 - +4.2 629,589 - +0.3 629,589 - -4.5 629,589 - +0.5 629,589 - -2.0 629,589 - +1.3 629,589 - +1.7 629,589 - -0.3 629,589 - +0.6 629,609 + GFF2571 0.15 +1.5 629,662 - GFF2571 0.35 -2.8 629,877 + -2.4 629,889 + +0.0 629,889 + -1.8 629,889 + -1.8 629,889 + +1.0 629,889 + -1.7 629,889 + -1.9 629,890 - -0.3 629,890 - -0.8 629,890 - +1.0 630,006 + GFF2572 0.10 +2.0 630,006 + GFF2572 0.10 +2.0 630,006 + GFF2572 0.10 +0.0 630,006 + GFF2572 0.10 +0.5 630,007 - GFF2572 0.11 -0.3 630,007 - GFF2572 0.11 +1.0 630,282 + GFF2572 0.70 -0.8 630,282 + GFF2572 0.70 +1.0 630,282 + GFF2572 0.70 +2.0 630,282 + GFF2572 0.70 +0.0 630,282 + GFF2572 0.70 -1.0 630,282 + GFF2572 0.70 +2.0 630,283 - GFF2572 0.70 +0.5 630,283 - GFF2572 0.70 -0.8 630,283 - GFF2572 0.70 -1.3 630,283 - GFF2572 0.70 +1.0 630,283 - GFF2572 0.70 -0.3 630,366 + GFF2572 0.88 -5.0 630,366 + GFF2572 0.88 -3.6 630,366 + GFF2572 0.88 -3.5 630,366 + GFF2572 0.88 -3.7 630,366 + GFF2572 0.88 -2.0 630,366 + GFF2572 0.88 +0.0 630,366 + GFF2572 0.88 -1.0 630,366 + GFF2572 0.88 -3.9 630,366 + GFF2572 0.88 -1.3 630,366 + GFF2572 0.88 -4.5 630,366 + GFF2572 0.88 -2.8 630,366 + GFF2572 0.88 -2.5 630,366 + GFF2572 0.88 -2.5 630,366 + GFF2572 0.88 -1.1 630,366 + GFF2572 0.88 -2.7 630,366 + GFF2572 0.88 -2.6 630,366 + GFF2572 0.88 -5.6 630,366 + GFF2572 0.88 -1.7 630,366 + GFF2572 0.88 -1.8 630,366 + GFF2572 0.88 -2.3 630,366 + GFF2572 0.88 -4.2 630,366 + GFF2572 0.88 +0.0 630,366 + GFF2572 0.88 -0.0 630,366 + GFF2572 0.88 -2.3 630,366 + GFF2572 0.88 -1.0 630,366 + GFF2572 0.88 -2.0 630,366 + GFF2572 0.88 -0.3 630,366 + GFF2572 0.88 -3.4 630,367 - GFF2572 0.88 +1.0 630,367 - GFF2572 0.88 +0.0 630,367 - GFF2572 0.88 -4.7 630,367 - GFF2572 0.88 -2.4 630,367 - GFF2572 0.88 -3.8 630,367 - GFF2572 0.88 -5.4 630,367 - GFF2572 0.88 -4.6 630,367 - GFF2572 0.88 -4.3 630,367 - GFF2572 0.88 -3.7 630,367 - GFF2572 0.88 -3.4 630,367 - GFF2572 0.88 +1.0 630,367 - GFF2572 0.88 -3.4 630,367 - GFF2572 0.88 -4.3 630,367 - GFF2572 0.88 -5.3 630,367 - GFF2572 0.88 -2.6 630,367 - GFF2572 0.88 -1.0 630,367 - GFF2572 0.88 -3.1 630,367 - GFF2572 0.88 -2.8 630,367 - GFF2572 0.88 -3.2 630,367 - GFF2572 0.88 -2.5 630,367 - GFF2572 0.88 -2.3 630,367 - GFF2572 0.88 -1.1 630,367 - GFF2572 0.88 -4.2 630,367 - GFF2572 0.88 -4.3 630,367 - GFF2572 0.88 -4.3 630,367 - GFF2572 0.88 -3.8 630,420 + -2.5 630,420 + -5.6 630,420 + -2.4 630,420 + -4.8 630,420 + -3.2 630,421 - -3.3 630,421 - -1.0 630,421 - -1.1 630,421 - -3.9 630,421 - -1.5 630,421 - -3.6 630,421 - -2.9 630,585 + GFF2573 0.13 +2.0 630,585 + GFF2573 0.13 -1.7 630,585 + GFF2573 0.13 -1.7 630,586 - GFF2573 0.13 -2.2 630,586 - GFF2573 0.13 -1.4 630,975 + GFF2573 0.51 -2.7 630,975 + GFF2573 0.51 +1.0 630,975 + GFF2573 0.51 -1.4 630,975 + GFF2573 0.51 -1.9 630,975 + GFF2573 0.51 +0.0 630,975 + GFF2573 0.51 -3.7 630,976 - GFF2573 0.51 -5.0 630,976 - GFF2573 0.51 -3.5 630,976 - GFF2573 0.51 -3.3 630,976 - GFF2573 0.51 -0.5 630,976 - GFF2573 0.51 -2.3 631,299 + GFF2573 0.82 -1.6 631,299 + GFF2573 0.82 -5.0 631,299 + GFF2573 0.82 -3.8 631,299 + GFF2573 0.82 -2.5 631,299 + GFF2573 0.82 -0.3 631,299 + GFF2573 0.82 -3.1 631,299 + GFF2573 0.82 +0.0 631,299 + GFF2573 0.82 -2.6 631,299 + GFF2573 0.82 -4.8 631,299 + GFF2573 0.82 -2.5 631,300 - GFF2573 0.82 -2.2 631,300 - GFF2573 0.82 -3.5 631,300 - GFF2573 0.82 +0.5 631,300 - GFF2573 0.82 -1.8 631,300 - GFF2573 0.82 -0.8 631,300 - GFF2573 0.82 -2.0 631,300 - GFF2573 0.82 -2.3 631,300 - GFF2573 0.82 -1.5
Or see this region's nucleotide sequence