Strain Fitness in Variovorax sp. SCN45 around GFF1957

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
649,552	-				+1.3
649,552	-				-0.3
649,742	-		GFF1956	0.21	+2.8
649,742	-		GFF1956	0.21	-1.3
650,210	-		GFF1956	0.75	-2.3
650,290	+		GFF1956	0.85	+0.0
650,313	+		GFF1956	0.87	+0.4
650,313	+		GFF1956	0.87	+1.0
650,313	+		GFF1956	0.87	+0.4
650,411	-				-2.1
650,411	-				-1.9
650,411	-				-1.7
650,529	-		GFF1957	0.34	-1.7
650,567	+		GFF1957	0.45	-2.0
650,568	-		GFF1957	0.45	-2.8
650,568	-		GFF1957	0.45	-1.3
650,794	-				-0.6
650,879	+				-1.3
650,880	-				+1.0