Strain Fitness in Variovorax sp. SCN45 around GFF170

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
199,710	+		GFF168	0.60	-2.5
199,710	+		GFF168	0.60	-1.5
199,710	+		GFF168	0.60	-3.4
199,722	+		GFF168	0.61	-2.0
199,723	-		GFF168	0.61	-3.6
199,758	+		GFF168	0.65	-3.5
199,761	+		GFF168	0.65	-1.5
199,761	+		GFF168	0.65	-1.6
199,761	+		GFF168	0.65	-1.8
199,761	+		GFF168	0.65	+0.5
199,761	+		GFF168	0.65	+0.5
199,761	+		GFF168	0.65	-1.6
199,761	+		GFF168	0.65	-0.0
199,761	+		GFF168	0.65	-1.3
199,762	-		GFF168	0.66	-1.6
199,762	-		GFF168	0.66	+0.5
199,773	+		GFF168	0.67	-2.7
199,774	-		GFF168	0.67	-1.8
199,893	+		GFF168	0.81	-1.0
199,894	-		GFF168	0.81	-0.0
200,043	+				-1.3
200,044	-				-1.3
200,175	+		GFF169	0.20	-3.3
200,175	+		GFF169	0.20	-0.8
200,175	+		GFF169	0.20	-0.0
200,175	+		GFF169	0.20	-0.5
200,175	+		GFF169	0.20	+0.0
200,175	+		GFF169	0.20	-1.9
200,176	-		GFF169	0.20	-1.8
200,176	-		GFF169	0.20	-0.8
200,176	-		GFF169	0.20	-2.6
200,303	+		GFF169	0.41	-0.3
200,303	+		GFF169	0.41	+1.0
200,303	+		GFF169	0.41	-1.6
200,303	+		GFF169	0.41	-2.5
200,304	-		GFF169	0.41	-0.3
200,304	-		GFF169	0.41	+0.3
200,304	-		GFF169	0.41	-0.6
200,321	+		GFF169	0.44	-0.5
200,322	-		GFF169	0.44	-1.3
200,322	-		GFF169	0.44	+0.1
200,322	-		GFF169	0.44	+2.2
200,334	+		GFF169	0.46	-2.9
200,471	+		GFF169	0.69	-1.3
200,471	+		GFF169	0.69	+0.5
200,471	+		GFF169	0.69	+2.2
200,471	+		GFF169	0.69	-2.9
200,471	+		GFF169	0.69	-3.0
200,471	+		GFF169	0.69	+2.6
200,471	+		GFF169	0.69	+1.3
200,471	+		GFF169	0.69	-0.9
200,472	-		GFF169	0.69	-0.8
200,472	-		GFF169	0.69	+0.7
200,472	-		GFF169	0.69	-0.8
200,526	+		GFF169	0.78	-1.0
200,526	+		GFF169	0.78	-0.8
200,526	+		GFF169	0.78	-2.7
200,527	-		GFF169	0.78	-1.6
200,594	+		GFF169	0.89	+1.7
200,594	+		GFF169	0.89	-1.7
200,594	+		GFF169	0.89	+0.5
200,594	+		GFF169	0.89	+0.8
200,595	-		GFF169	0.89	+1.8
200,595	-		GFF169	0.89	-4.1
200,595	-		GFF169	0.89	-2.2
200,595	-		GFF169	0.89	-1.2
200,931	+		GFF170	0.23	-3.5
200,931	+		GFF170	0.23	+1.3
200,932	-		GFF170	0.23	-2.2
200,932	-		GFF170	0.23	+0.2
200,932	-		GFF170	0.23	-0.8
200,946	+		GFF170	0.24	-1.0
200,947	-		GFF170	0.24	-0.5
201,149	+		GFF170	0.41	-1.3
201,149	+		GFF170	0.41	-0.5
201,149	+		GFF170	0.41	-0.8
201,149	+		GFF170	0.41	+0.8
201,150	-		GFF170	0.41	+1.7
201,210	+		GFF170	0.46	-1.0
201,211	-		GFF170	0.46	+0.4
201,211	-		GFF170	0.46	+4.4
201,735	+		GFF170	0.89	-4.2
201,735	+		GFF170	0.89	+0.4
201,735	+		GFF170	0.89	+0.1
201,735	+		GFF170	0.89	-0.5
201,735	+		GFF170	0.89	+0.3
201,735	+		GFF170	0.89	-1.0
201,735	+		GFF170	0.89	+0.2
201,735	+		GFF170	0.89	+1.9
201,735	+		GFF170	0.89	-0.6
201,735	+		GFF170	0.89	-2.5
201,735	+		GFF170	0.89	-2.8
201,735	+		GFF170	0.89	-3.5
201,735	+		GFF170	0.89	-0.6
201,735	+		GFF170	0.89	-0.5
201,736	-		GFF170	0.89	+0.4
201,736	-		GFF170	0.89	+2.0
201,736	-		GFF170	0.89	-0.5
201,736	-		GFF170	0.89	-0.0
201,736	-		GFF170	0.89	+1.5
201,736	-		GFF170	0.89	+1.1
201,736	-		GFF170	0.89	+0.4
201,736	-		GFF170	0.89	-0.8
201,736	-		GFF170	0.89	-0.0
201,736	-		GFF170	0.89	+0.2
201,773	+				-0.7
201,773	+				-0.5
201,870	+				-1.8
201,870	+				+1.5
201,870	+				-0.4
201,870	+				-2.6
201,870	+				-0.0
201,870	+				-2.8
201,870	+				-0.7
201,870	+				+0.4
201,870	+				+1.2
201,870	+				-3.5
201,870	+				+0.0
201,870	+				-0.8
201,870	+				+1.2
201,870	+				-0.7
201,871	-				+0.1
201,871	-				-1.5
201,871	-				+1.9
201,871	-				+1.0
201,871	-				-1.9
201,871	-				-1.6
201,871	-				-0.4
201,871	-				-0.1
201,871	-				-0.4
201,871	-				-1.6
201,882	+				+0.2
201,882	+				+0.5
201,883	-				-0.3
201,927	-				-1.5
201,927	-				+0.7
202,032	+		GFF171	0.24	+1.3
202,032	+		GFF171	0.24	-1.8
202,033	-		GFF171	0.24	-1.5
202,033	-		GFF171	0.24	+0.1
202,033	-		GFF171	0.24	-0.0
202,033	-		GFF171	0.24	-1.0
202,033	-		GFF171	0.24	-1.0
202,033	-		GFF171	0.24	-2.4
202,036	+		GFF171	0.25	+0.6
202,036	+		GFF171	0.25	+1.9
202,036	+		GFF171	0.25	-1.0
202,036	+		GFF171	0.25	+0.7
202,036	+		GFF171	0.25	+0.2
202,036	+		GFF171	0.25	+0.3
202,036	+		GFF171	0.25	+0.8
202,036	+		GFF171	0.25	-0.5
202,036	+		GFF171	0.25	-2.8
202,036	+		GFF171	0.25	+0.7
202,037	-		GFF171	0.25	+0.5
202,037	-		GFF171	0.25	+0.6
202,037	-		GFF171	0.25	+0.1
202,037	-		GFF171	0.25	-0.8
202,037	-		GFF171	0.25	-0.6
202,384	+				-1.3
202,384	+				+0.2
202,385	-				-2.5
202,420	+				+0.3
202,420	+				-1.6
202,420	+				+0.3
202,420	+				-1.3
202,420	+				-0.0
202,421	-				+1.0
202,421	-				+0.2
202,450	+				+1.0
202,450	+				-0.0
202,450	+				-0.9
202,450	+				-1.9
202,450	+				+0.5
202,450	+				-0.0
202,450	+				-1.1
202,450	+				-0.6
202,450	+				-1.0
202,450	+				-2.3
202,450	+				+0.9
202,450	+				+0.9
202,450	+				-2.2
202,450	+				-2.8
202,450	+				-2.2
202,450	+				-3.4
202,450	+				+0.2
202,451	-				+0.6
202,451	-				+1.4
202,451	-				+1.0
202,451	-				+0.8
202,451	-				+0.5
202,451	-				-1.3
202,451	-				-1.0
202,451	-				-1.1
202,451	-				+0.5
202,451	-				+0.7
202,451	-				+1.5
202,451	-				+0.4
202,451	-				-1.6
202,451	-				-1.9
202,451	-				+0.5
202,501	+				+0.4
202,501	+				+1.5
202,501	+				-3.4
202,501	+				+1.1
202,502	-				-0.3
202,502	-				-0.4
202,502	-				+0.3
202,502	-				-2.0