Strain Fitness in Variovorax sp. SCN45 around GFF7378

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
7,575	-		GFF7377	0.35	-2.0
7,603	+		GFF7377	0.37	-0.8
7,603	+		GFF7377	0.37	-1.0
7,603	+		GFF7377	0.37	-0.6
7,603	+		GFF7377	0.37	-3.1
7,603	+		GFF7377	0.37	-2.5
7,603	+		GFF7377	0.37	-2.0
7,604	-		GFF7377	0.37	-0.6
7,604	-		GFF7377	0.37	-3.0
7,766	+		GFF7377	0.48	-0.1
7,766	+		GFF7377	0.48	-3.6
7,766	+		GFF7377	0.48	-2.9
7,766	+		GFF7377	0.48	-1.2
7,766	+		GFF7377	0.48	-2.7
7,766	+		GFF7377	0.48	-0.7
7,767	-		GFF7377	0.48	-3.8
7,767	-		GFF7377	0.48	-1.5
7,804	+		GFF7377	0.50	-3.0
8,198	+		GFF7377	0.76	-2.0
8,198	+		GFF7377	0.76	-1.9
8,199	-		GFF7377	0.76	-1.6
8,199	-		GFF7377	0.76	-2.2
8,199	-		GFF7377	0.76	-1.1
8,199	-		GFF7377	0.76	-0.6
8,199	-		GFF7377	0.76	-1.7
8,199	-		GFF7377	0.76	-2.2
8,474	+				-1.6
8,475	-				-0.1
8,475	-				-0.8
8,475	-				-1.6
8,554	+				-3.1
8,554	+				-0.7
8,554	+				-1.8
8,554	+				-3.4
8,554	+				-1.8
8,554	+				-1.2
8,555	-				-1.6
8,555	-				-1.8
8,555	-				-2.2
8,638	+		GFF7378	0.20	+0.4
8,740	+		GFF7378	0.46	+1.4
9,111	+		GFF7379	0.14	-3.1
9,111	+		GFF7379	0.14	-2.6
9,111	+		GFF7379	0.14	-3.4
9,111	+		GFF7379	0.14	-2.2
9,111	+		GFF7379	0.14	-1.0
9,111	+		GFF7379	0.14	-2.8
9,111	+		GFF7379	0.14	-2.9
9,111	+		GFF7379	0.14	-2.5
9,111	+		GFF7379	0.14	-1.5
9,112	-		GFF7379	0.14	-0.6
9,112	-		GFF7379	0.14	-0.6
9,112	-		GFF7379	0.14	-3.3
9,112	-		GFF7379	0.14	-3.2
9,112	-		GFF7379	0.14	-0.8
9,112	-		GFF7379	0.14	-3.5
9,112	-		GFF7379	0.14	+0.0
9,112	-		GFF7379	0.14	+0.7
9,112	-		GFF7379	0.14	-1.6
9,112	-		GFF7379	0.14	+0.9
9,112	-		GFF7379	0.14	-2.0
9,316	-		GFF7379	0.32	-1.5
9,316	-		GFF7379	0.32	-1.6
9,316	-		GFF7379	0.32	-0.6
9,316	-		GFF7379	0.32	-0.1
9,316	-		GFF7379	0.32	-0.4
9,316	-		GFF7379	0.32	-1.5
9,316	-		GFF7379	0.32	-4.4
9,316	-		GFF7379	0.32	-0.4
9,390	+		GFF7379	0.38	-1.7
9,390	+		GFF7379	0.38	-0.9
9,390	+		GFF7379	0.38	-2.5
9,390	+		GFF7379	0.38	-1.9
9,390	+		GFF7379	0.38	-1.8
9,390	+		GFF7379	0.38	-1.2
9,390	+		GFF7379	0.38	+1.2
9,391	-		GFF7379	0.38	-0.6
9,391	-		GFF7379	0.38	-2.0
9,391	-		GFF7379	0.38	-0.1
9,391	-		GFF7379	0.38	+0.6
9,391	-		GFF7379	0.38	+1.2
9,391	-		GFF7379	0.38	-0.6
9,391	-		GFF7379	0.38	-0.6
9,391	-		GFF7379	0.38	-2.1
9,528	+		GFF7379	0.50	-0.8
9,529	-		GFF7379	0.50	-1.6
9,529	-		GFF7379	0.50	-2.6
9,529	-		GFF7379	0.50	-3.0
9,735	+		GFF7379	0.68	-0.6
9,736	-		GFF7379	0.68	-0.6
9,736	-		GFF7379	0.68	-1.8
9,736	-		GFF7379	0.68	-1.2
9,891	+		GFF7379	0.81	+0.6
9,891	+		GFF7379	0.81	-0.6
9,891	+		GFF7379	0.81	-3.2
9,891	+		GFF7379	0.81	-2.9
9,891	+		GFF7379	0.81	-0.2
9,891	+		GFF7379	0.81	+1.2
9,891	+		GFF7379	0.81	-0.1
9,891	+		GFF7379	0.81	-1.0
9,891	+		GFF7379	0.81	+0.2
9,891	+		GFF7379	0.81	-1.2
9,892	-		GFF7379	0.81	-2.1
9,892	-		GFF7379	0.81	-1.1
9,892	-		GFF7379	0.81	-1.5
9,892	-		GFF7379	0.81	-3.0
9,892	-		GFF7379	0.81	-3.4
9,892	-		GFF7379	0.81	-2.8
9,892	-		GFF7379	0.81	-0.8
9,892	-		GFF7379	0.81	-1.6
9,892	-		GFF7379	0.81	+2.2
9,892	-		GFF7379	0.81	-3.7
9,892	-		GFF7379	0.81	-0.6
9,892	-		GFF7379	0.81	-0.1
9,892	-		GFF7379	0.81	-1.8