Strain Fitness in Variovorax sp. SCN45 around GFF6853

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
47,706	+				-0.8
47,706	+				-0.6
47,706	+				-0.5
47,706	+				+0.3
47,707	-				-0.6
47,707	-				+1.0
47,707	-				+0.5
47,707	-				+0.1
48,575	-				+1.4
48,575	-				-2.5
48,582	+				-0.4
48,582	+				-4.1
48,582	+				-0.9
48,582	+				-0.9
48,582	+				-1.7
48,583	-				+0.4
48,583	-				+1.4
48,583	-				-1.6
48,583	-				-0.9
48,713	-				-0.4
48,946	+		GFF6853	0.31	+1.4
48,946	+		GFF6853	0.31	-1.5
49,337	-		GFF6853	0.72	-1.6
49,644	+				+0.3
49,645	-				-1.7
49,645	-				+0.9
49,645	-				-0.6
49,645	-				-2.9
49,922	+		GFF6854	0.53	-3.9
49,923	-		GFF6854	0.53	+0.4
50,009	+		GFF6854	0.68	-1.0
50,010	-		GFF6854	0.68	-1.6
50,010	-		GFF6854	0.68	+0.7
50,063	+		GFF6854	0.78	+1.5
50,063	+		GFF6854	0.78	+0.4
50,063	+		GFF6854	0.78	-0.5
50,064	-		GFF6854	0.78	+0.5
50,064	-		GFF6854	0.78	-2.7
50,138	+				+0.4