Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6738 and GFF6739 overlap by 4 nucleotides GFF6739 and GFF6740 are separated by 204 nucleotides
GFF6738 - Uncharacterized aldehyde oxidase, molybdopterin-binding subunit, at 50,067 to 52,316
GFF6738
GFF6739 - Putative diheme cytochrome c-553, at 52,313 to 53,617
GFF6739
GFF6740 - hypothetical protein, at 53,822 to 54,547
GFF6740
Position (kb) 52
53
54 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 51.393 kb on + strand, within GFF6738 at 51.393 kb on + strand, within GFF6738 at 51.393 kb on + strand, within GFF6738 at 51.394 kb on - strand, within GFF6738 at 51.394 kb on - strand, within GFF6738 at 51.394 kb on - strand, within GFF6738 at 51.394 kb on - strand, within GFF6738 at 51.552 kb on + strand, within GFF6738 at 51.552 kb on + strand, within GFF6738 at 51.552 kb on + strand, within GFF6738 at 51.552 kb on + strand, within GFF6738 at 51.553 kb on - strand, within GFF6738 at 51.553 kb on - strand, within GFF6738 at 52.367 kb on + strand at 52.460 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.563 kb on - strand, within GFF6739 at 52.563 kb on - strand, within GFF6739 at 52.563 kb on - strand, within GFF6739 at 52.685 kb on + strand, within GFF6739 at 52.685 kb on + strand, within GFF6739 at 52.686 kb on - strand, within GFF6739 at 52.736 kb on + strand, within GFF6739 at 52.736 kb on + strand, within GFF6739 at 52.736 kb on + strand, within GFF6739 at 52.736 kb on + strand, within GFF6739 at 52.898 kb on + strand, within GFF6739 at 52.898 kb on + strand, within GFF6739 at 52.898 kb on + strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 53.012 kb on + strand, within GFF6739 at 53.012 kb on + strand, within GFF6739 at 53.012 kb on + strand, within GFF6739 at 53.013 kb on - strand, within GFF6739 at 53.075 kb on + strand, within GFF6739 at 53.486 kb on + strand, within GFF6739 at 53.487 kb on - strand at 53.487 kb on - strand at 53.510 kb on + strand at 53.511 kb on - strand at 53.511 kb on - strand at 53.543 kb on + strand at 53.544 kb on - strand at 53.544 kb on - strand at 53.623 kb on + strand at 53.624 kb on - strand at 53.658 kb on - strand at 53.672 kb on - strand at 53.672 kb on - strand at 53.672 kb on - strand at 53.758 kb on - strand at 53.828 kb on - strand at 53.828 kb on - strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.865 kb on - strand at 53.865 kb on - strand at 53.895 kb on - strand, within GFF6740 at 54.020 kb on + strand, within GFF6740 at 54.106 kb on - strand, within GFF6740 at 54.106 kb on - strand, within GFF6740
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 51,393 + GFF6738 0.59 -4.7 51,393 + GFF6738 0.59 -0.8 51,393 + GFF6738 0.59 +1.3 51,394 - GFF6738 0.59 -2.6 51,394 - GFF6738 0.59 -1.2 51,394 - GFF6738 0.59 +1.4 51,394 - GFF6738 0.59 -0.6 51,552 + GFF6738 0.66 +0.9 51,552 + GFF6738 0.66 -0.8 51,552 + GFF6738 0.66 -3.3 51,552 + GFF6738 0.66 -0.1 51,553 - GFF6738 0.66 +0.2 51,553 - GFF6738 0.66 -1.4 52,367 + +0.9 52,460 + GFF6739 0.11 -0.2 52,562 + GFF6739 0.19 +1.6 52,562 + GFF6739 0.19 +2.5 52,562 + GFF6739 0.19 +0.4 52,562 + GFF6739 0.19 +0.6 52,562 + GFF6739 0.19 +1.5 52,563 - GFF6739 0.19 +1.5 52,563 - GFF6739 0.19 +0.8 52,563 - GFF6739 0.19 -0.7 52,685 + GFF6739 0.29 +0.1 52,685 + GFF6739 0.29 -1.3 52,686 - GFF6739 0.29 +0.7 52,736 + GFF6739 0.32 -1.5 52,736 + GFF6739 0.32 +0.7 52,736 + GFF6739 0.32 -1.8 52,736 + GFF6739 0.32 +2.8 52,898 + GFF6739 0.45 -2.4 52,898 + GFF6739 0.45 +0.0 52,898 + GFF6739 0.45 -0.2 52,899 - GFF6739 0.45 +1.1 52,899 - GFF6739 0.45 +1.7 52,899 - GFF6739 0.45 +0.1 52,899 - GFF6739 0.45 -1.7 52,899 - GFF6739 0.45 +0.5 53,012 + GFF6739 0.54 +1.0 53,012 + GFF6739 0.54 -0.6 53,012 + GFF6739 0.54 -0.7 53,013 - GFF6739 0.54 -0.5 53,075 + GFF6739 0.58 -1.9 53,486 + GFF6739 0.90 +1.3 53,487 - -1.0 53,487 - -1.9 53,510 + +0.2 53,511 - -2.5 53,511 - +1.1 53,543 + -1.4 53,544 - -1.8 53,544 - -3.2 53,623 + -1.0 53,624 - -0.4 53,658 - +2.9 53,672 - +1.0 53,672 - +1.0 53,672 - +1.2 53,758 - -0.4 53,828 - -1.5 53,828 - +2.0 53,864 + -1.9 53,864 + -2.0 53,864 + -2.2 53,864 + -3.0 53,864 + -2.7 53,864 + +0.7 53,864 + -2.4 53,865 - +2.2 53,865 - -3.2 53,895 - GFF6740 0.10 -2.4 54,020 + GFF6740 0.27 -2.5 54,106 - GFF6740 0.39 +0.2 54,106 - GFF6740 0.39 +1.3
Or see this region's nucleotide sequence