Strain Fitness in Variovorax sp. SCN45 around GFF6602

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
48,161	+		GFF6601	0.73	+0.8
48,220	-		GFF6601	0.76	-0.8
48,343	-		GFF6601	0.82	+0.0
48,390	+		GFF6601	0.84	-0.4
48,390	+		GFF6601	0.84	-1.7
48,390	+		GFF6601	0.84	-0.8
48,581	+				-1.7
48,717	+				-0.4
48,767	-				-0.5
49,041	-				+1.0
49,041	-				+3.4
49,041	-				-1.1
49,108	+				+0.6
49,383	+		GFF6602	0.40	-1.6
49,384	-		GFF6602	0.40	-2.7
49,384	-		GFF6602	0.40	-1.6
49,422	-		GFF6602	0.47	-2.6
49,422	-		GFF6602	0.47	-1.2
49,447	+		GFF6602	0.51	-1.0
49,565	-		GFF6602	0.72	-4.4
49,597	+		GFF6602	0.77	+0.9
49,597	+		GFF6602	0.77	-0.4
49,598	-		GFF6602	0.77	+0.7
49,598	-		GFF6602	0.77	-3.4
49,598	-		GFF6602	0.77	-1.4
49,715	+				-0.9
49,715	+				-0.0
49,773	+				-3.6
49,919	+		GFF6603	0.36	+0.3
49,920	-		GFF6603	0.36	-2.0
49,920	-		GFF6603	0.36	-0.5
49,920	-		GFF6603	0.36	-0.4
50,020	-		GFF6603	0.54	-2.5
50,099	+		GFF6603	0.69	+1.6
50,100	-		GFF6603	0.69	+1.4
50,130	+		GFF6603	0.74	-0.0
50,130	+		GFF6603	0.74	-4.1
50,131	-		GFF6603	0.75	+1.8
50,131	-		GFF6603	0.75	+0.0
50,131	-		GFF6603	0.75	-1.0
50,131	-		GFF6603	0.75	+0.9
50,131	-		GFF6603	0.75	-1.6
50,154	+		GFF6603	0.79	+0.6
50,154	+		GFF6603	0.79	-0.0
50,154	+		GFF6603	0.79	+0.1
50,155	-		GFF6603	0.79	+0.1
50,155	-		GFF6603	0.79	-3.1
50,155	-		GFF6603	0.79	-2.0
50,414	+		GFF6604	0.54	-0.2