Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF621 and GFF622 overlap by 4 nucleotides GFF622 and GFF623 overlap by 4 nucleotides GFF623 and GFF624 are separated by 76 nucleotides
GFF621 - Aspartate aminotransferase (EC 2.6.1.1), at 668,367 to 669,545
GFF621
GFF622 - BUG/TctC family periplasmic protein, at 669,542 to 670,528
GFF622
GFF623 - Demethylmenaquinone methyltransferase-like protein, at 670,525 to 671,253
GFF623
GFF624 - hypothetical protein, at 671,330 to 671,680
GFF624
Position (kb) 669
670
671 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 668.580 kb on + strand, within GFF621 at 668.856 kb on + strand, within GFF621 at 668.856 kb on + strand, within GFF621 at 668.856 kb on + strand, within GFF621 at 668.856 kb on + strand, within GFF621 at 668.857 kb on - strand, within GFF621 at 668.857 kb on - strand, within GFF621 at 668.857 kb on - strand, within GFF621 at 668.857 kb on - strand, within GFF621 at 668.857 kb on - strand, within GFF621 at 668.857 kb on - strand, within GFF621 at 668.857 kb on - strand, within GFF621 at 668.864 kb on + strand, within GFF621 at 668.864 kb on + strand, within GFF621 at 668.934 kb on + strand, within GFF621 at 668.934 kb on + strand, within GFF621 at 668.934 kb on + strand, within GFF621 at 668.934 kb on + strand, within GFF621 at 668.934 kb on + strand, within GFF621 at 668.934 kb on + strand, within GFF621 at 668.935 kb on - strand, within GFF621 at 668.949 kb on + strand, within GFF621 at 668.949 kb on + strand, within GFF621 at 668.949 kb on + strand, within GFF621 at 668.950 kb on - strand, within GFF621 at 668.950 kb on - strand, within GFF621 at 669.036 kb on + strand, within GFF621 at 669.037 kb on - strand, within GFF621 at 669.288 kb on + strand, within GFF621 at 669.288 kb on + strand, within GFF621 at 669.289 kb on - strand, within GFF621 at 669.289 kb on - strand, within GFF621 at 669.417 kb on + strand, within GFF621 at 669.932 kb on + strand, within GFF622 at 669.933 kb on - strand, within GFF622 at 669.933 kb on - strand, within GFF622 at 669.933 kb on - strand, within GFF622 at 669.933 kb on - strand, within GFF622 at 669.989 kb on + strand, within GFF622 at 669.990 kb on - strand, within GFF622 at 670.106 kb on + strand, within GFF622 at 670.107 kb on - strand, within GFF622 at 670.107 kb on - strand, within GFF622 at 670.107 kb on - strand, within GFF622 at 670.107 kb on - strand, within GFF622 at 670.107 kb on - strand, within GFF622 at 671.090 kb on + strand, within GFF623 at 671.091 kb on - strand, within GFF623 at 671.331 kb on + strand at 671.331 kb on + strand at 671.331 kb on + strand at 671.331 kb on + strand at 671.331 kb on + strand at 671.331 kb on + strand at 671.332 kb on - strand at 671.332 kb on - strand at 671.332 kb on - strand at 671.374 kb on - strand, within GFF624 at 671.520 kb on + strand, within GFF624
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 668,580 + GFF621 0.18 -3.2 668,856 + GFF621 0.41 +1.8 668,856 + GFF621 0.41 +0.0 668,856 + GFF621 0.41 -1.0 668,856 + GFF621 0.41 -0.8 668,857 - GFF621 0.42 +0.9 668,857 - GFF621 0.42 -2.1 668,857 - GFF621 0.42 -0.4 668,857 - GFF621 0.42 +1.3 668,857 - GFF621 0.42 +0.9 668,857 - GFF621 0.42 -0.1 668,857 - GFF621 0.42 +2.1 668,864 + GFF621 0.42 +1.5 668,864 + GFF621 0.42 -0.0 668,934 + GFF621 0.48 -1.6 668,934 + GFF621 0.48 +0.6 668,934 + GFF621 0.48 +0.4 668,934 + GFF621 0.48 -0.3 668,934 + GFF621 0.48 -1.5 668,934 + GFF621 0.48 +0.4 668,935 - GFF621 0.48 -1.5 668,949 + GFF621 0.49 -2.0 668,949 + GFF621 0.49 +0.1 668,949 + GFF621 0.49 -2.3 668,950 - GFF621 0.49 +0.2 668,950 - GFF621 0.49 -0.0 669,036 + GFF621 0.57 +0.7 669,037 - GFF621 0.57 +0.8 669,288 + GFF621 0.78 -0.7 669,288 + GFF621 0.78 +0.2 669,289 - GFF621 0.78 -1.5 669,289 - GFF621 0.78 -1.7 669,417 + GFF621 0.89 -1.6 669,932 + GFF622 0.40 -1.0 669,933 - GFF622 0.40 +1.5 669,933 - GFF622 0.40 -1.5 669,933 - GFF622 0.40 +0.3 669,933 - GFF622 0.40 -0.8 669,989 + GFF622 0.45 +0.3 669,990 - GFF622 0.45 +0.7 670,106 + GFF622 0.57 -1.2 670,107 - GFF622 0.57 -1.0 670,107 - GFF622 0.57 +1.3 670,107 - GFF622 0.57 -0.1 670,107 - GFF622 0.57 +1.0 670,107 - GFF622 0.57 +0.3 671,090 + GFF623 0.78 -0.6 671,091 - GFF623 0.78 +0.6 671,331 + -0.6 671,331 + +0.7 671,331 + -0.1 671,331 + -1.7 671,331 + +0.5 671,331 + -0.6 671,332 - -1.7 671,332 - -0.0 671,332 - -0.4 671,374 - GFF624 0.13 -0.7 671,520 + GFF624 0.54 -2.2
Or see this region's nucleotide sequence