Strain Fitness in Variovorax sp. SCN45 around GFF6103

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
2,403	-		GFF6102	0.36	-0.3
2,820	+		GFF6102	0.66	-0.1
2,992	+		GFF6102	0.79	+0.8
2,992	+		GFF6102	0.79	+2.6
2,992	+		GFF6102	0.79	-0.7
2,992	+		GFF6102	0.79	+0.6
2,992	+		GFF6102	0.79	+0.8
2,992	+		GFF6102	0.79	+0.7
2,992	+		GFF6102	0.79	-1.6
2,992	+		GFF6102	0.79	+1.6
2,992	+		GFF6102	0.79	+0.0
2,992	+		GFF6102	0.79	+0.3
2,992	+		GFF6102	0.79	-3.7
2,992	+		GFF6102	0.79	+1.2
2,992	+		GFF6102	0.79	+0.2
2,992	+		GFF6102	0.79	+0.6
2,992	+		GFF6102	0.79	+0.4
2,992	+		GFF6102	0.79	-0.1
2,992	+		GFF6102	0.79	-0.7
2,992	+		GFF6102	0.79	-3.8
2,993	-		GFF6102	0.79	-2.1
2,993	-		GFF6102	0.79	-1.0
2,993	-		GFF6102	0.79	+0.9
2,993	-		GFF6102	0.79	-1.0
2,993	-		GFF6102	0.79	-1.3
2,993	-		GFF6102	0.79	+0.0
2,993	-		GFF6102	0.79	-1.1
2,993	-		GFF6102	0.79	-0.4
2,993	-		GFF6102	0.79	-0.5
2,993	-		GFF6102	0.79	+1.1
2,993	-		GFF6102	0.79	+0.1
2,993	-		GFF6102	0.79	+0.3
2,993	-		GFF6102	0.79	+0.3
2,993	-		GFF6102	0.79	+0.8
2,993	-		GFF6102	0.79	-0.2
2,993	-		GFF6102	0.79	-1.0
2,993	-		GFF6102	0.79	-0.1
2,993	-		GFF6102	0.79	-1.4
2,993	-		GFF6102	0.79	-1.0
3,006	+		GFF6102	0.80	+0.6
3,079	-		GFF6102	0.85	-1.0
3,212	+				-1.4
3,212	+				-0.1
3,213	-				-3.3
3,213	-				-2.2
3,253	-				-2.3
3,253	-				+1.0
3,367	+				-1.6
3,368	-				+0.4
3,368	-				+1.3
3,368	-				-2.9
3,412	+				-0.7
3,413	-				-1.9
3,413	-				+0.6
3,439	+		GFF6103	0.21	-0.3
3,439	+		GFF6103	0.21	+1.8
3,440	-		GFF6103	0.22	-1.4
3,445	+		GFF6103	0.25	-1.9
3,445	+		GFF6103	0.25	-2.0
3,445	+		GFF6103	0.25	+1.5
3,446	-		GFF6103	0.26	+1.1
3,446	-		GFF6103	0.26	-0.2
3,446	-		GFF6103	0.26	+2.3
3,552	-		GFF6103	0.89	+1.6
3,552	-		GFF6103	0.89	-2.6
3,552	-		GFF6103	0.89	+0.0
3,552	-		GFF6103	0.89	-1.2
3,593	-				-1.9
3,611	+				-3.3
3,630	-				-2.6
3,638	+				-1.2
3,648	+				-1.9
3,679	+				-0.8
3,680	-				-0.8
3,680	-				+0.1
3,680	-				-3.5
3,680	-				+0.7
3,755	+				+0.2
3,765	+				+0.6
3,765	+				-1.3
3,765	+				+0.7
3,766	-				+1.9
3,784	+				+1.1
3,784	+				+0.2
3,784	+				-0.7
3,784	+				-1.5
3,784	+				-0.9
3,784	+				+1.3
3,784	+				-1.3
3,784	+				+1.3
3,784	+				+0.5
3,785	-				+1.7
3,785	-				-0.6
3,785	-				-4.0
3,785	-				-1.9
3,785	-				+0.4
3,785	-				+0.6
3,785	-				+0.4
3,785	-				+0.1
3,788	+				-3.0
3,788	+				-2.0
3,789	-				-0.0
3,789	-				-2.1
3,795	+				-0.7
3,795	+				-0.9
3,796	-				+0.8
3,845	-				-2.0
3,919	+				-1.4
3,942	+				-1.1
3,942	+				-1.7
3,942	+				-0.1
3,942	+				+1.3
3,943	-				+1.8
3,943	-				-1.2
3,996	+				-0.8
3,996	+				-1.2
3,997	-				+1.4
3,997	-				-0.9
3,997	-				-0.2
3,997	-				+0.0
4,127	+		GFF6104	0.16	+0.7
4,128	-		GFF6104	0.16	-1.2
4,358	+		GFF6104	0.42	-0.6
4,359	-		GFF6104	0.42	+2.7
4,475	+		GFF6104	0.55	+0.0
4,475	+		GFF6104	0.55	+0.0
4,475	+		GFF6104	0.55	-0.6
4,475	+		GFF6104	0.55	-0.4
4,475	+		GFF6104	0.55	-0.3
4,475	+		GFF6104	0.55	+0.1
4,475	+		GFF6104	0.55	+1.3
4,476	-		GFF6104	0.55	-1.2
4,476	-		GFF6104	0.55	-1.7
4,476	-		GFF6104	0.55	-0.4