Strain Fitness in Variovorax sp. SCN45 around GFF5853

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
31,174	-		GFF5852	0.20	-1.3
31,182	+		GFF5852	0.21	+1.4
31,183	-		GFF5852	0.21	-0.2
31,189	-		GFF5852	0.21	+0.1
31,189	-		GFF5852	0.21	-2.1
31,189	-		GFF5852	0.21	+0.8
31,476	+		GFF5852	0.44	-1.9
31,476	+		GFF5852	0.44	-2.6
31,479	+		GFF5852	0.44	-0.9
31,735	+		GFF5852	0.65	+0.7
31,736	-		GFF5852	0.65	-0.8
32,866	+		GFF5853	0.33	+1.7
33,736	+		GFF5853	0.74	+0.8
33,736	+		GFF5853	0.74	-1.4
33,737	-		GFF5853	0.74	+2.5
33,737	-		GFF5853	0.74	+1.1
33,737	-		GFF5853	0.74	+1.9
33,871	+		GFF5853	0.80	+0.1
33,871	+		GFF5853	0.80	+1.1
33,872	-		GFF5853	0.80	-0.6
33,872	-		GFF5853	0.80	+0.7
33,872	-		GFF5853	0.80	+0.8
33,872	-		GFF5853	0.80	-0.3
33,872	-		GFF5853	0.80	-0.3
34,264	+				-2.8
34,335	+				+0.4
34,335	+				-0.1
34,368	+				-1.2
34,428	+				-1.1
34,429	-				-3.8
34,429	-				+1.5
34,429	-				-3.4
34,429	-				+0.6
34,429	-				+0.6
34,482	+		GFF5854	0.14	-1.8
34,482	+		GFF5854	0.14	-1.5
34,482	+		GFF5854	0.14	-1.8
34,689	+		GFF5854	0.28	-0.1
34,690	-		GFF5854	0.28	+0.2
34,690	-		GFF5854	0.28	-0.2
34,690	-		GFF5854	0.28	-0.9
34,690	-		GFF5854	0.28	+2.8
34,726	-		GFF5854	0.31	-0.1
34,726	-		GFF5854	0.31	-1.2
34,726	-		GFF5854	0.31	-3.1