Strain Fitness in Variovorax sp. SCN45 around GFF5735

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
108,502	+				-0.5
108,536	+				-3.6
108,536	+				-3.4
108,537	-				+0.2
108,544	+				-3.7
108,545	-				-0.2
108,545	-				+0.6
108,564	-				+0.0
108,564	-				-1.9
108,636	-				+0.5
108,747	-		GFF5735	0.10	+0.8
108,747	-		GFF5735	0.10	-2.3
108,747	-		GFF5735	0.10	+0.2
108,747	-		GFF5735	0.10	-0.8
108,755	+		GFF5735	0.11	+0.4
108,756	-		GFF5735	0.11	-0.5
108,995	+		GFF5735	0.23	-2.8
108,996	-		GFF5735	0.23	-1.9
109,061	+		GFF5735	0.26	-0.2
109,061	+		GFF5735	0.26	-0.8
109,220	+		GFF5735	0.34	-0.8
109,221	-		GFF5735	0.34	-1.1
109,221	-		GFF5735	0.34	-0.6
109,221	-		GFF5735	0.34	+0.5
109,221	-		GFF5735	0.34	+0.3
109,266	-		GFF5735	0.37	+2.4
109,266	-		GFF5735	0.37	-1.0
109,631	+		GFF5735	0.55	+0.2
109,632	-		GFF5735	0.55	-0.5
109,670	+		GFF5735	0.57	+0.3
110,063	+		GFF5735	0.77	-2.2
110,088	-		GFF5735	0.79	-0.9
110,438	+				+1.2
110,438	+				+1.3
110,439	-				+0.3
110,570	-				-1.5
110,570	-				+0.6
110,570	-				-1.2
110,728	+		GFF5736	0.15	+1.7
110,728	+		GFF5736	0.15	-1.5
110,728	+		GFF5736	0.15	-1.4
111,010	+		GFF5736	0.38	-1.7
111,011	-		GFF5736	0.38	-0.6
111,011	-		GFF5736	0.38	+0.6
111,011	-		GFF5736	0.38	+1.0
111,011	-		GFF5736	0.38	-1.9
111,130	-		GFF5736	0.48	-1.0
111,238	+		GFF5736	0.57	+0.5
111,238	+		GFF5736	0.57	+0.7
111,239	-		GFF5736	0.57	+1.6
111,239	-		GFF5736	0.57	+1.2
111,289	+		GFF5736	0.61	+1.6
111,290	-		GFF5736	0.61	+1.1