Strain Fitness in Variovorax sp. SCN45 around GFF5202

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
62,026	-				-1.4
62,223	+		GFF5201	0.23	-1.6
62,260	-		GFF5201	0.27	+1.1
62,385	+		GFF5201	0.41	-1.2
62,385	+		GFF5201	0.41	+0.6
62,385	+		GFF5201	0.41	+1.2
62,385	+		GFF5201	0.41	-1.2
62,386	-		GFF5201	0.41	+1.3
62,386	-		GFF5201	0.41	-0.7
62,506	-		GFF5201	0.54	-2.8
62,506	-		GFF5201	0.54	-0.5
62,515	+		GFF5201	0.55	+1.8
62,516	-		GFF5201	0.55	+0.5
62,731	-		GFF5201	0.78	-3.0
62,731	-		GFF5201	0.78	-0.4
62,757	+		GFF5201	0.81	+0.6
62,758	-		GFF5201	0.81	+0.9
63,068	+		GFF5202	0.30	-1.2
63,068	+		GFF5202	0.30	-1.4
63,068	+		GFF5202	0.30	-0.1
63,068	+		GFF5202	0.30	-0.5
63,069	-		GFF5202	0.31	+0.3
63,072	-		GFF5202	0.32	-3.6
63,125	+		GFF5202	0.51	-1.0
63,125	+		GFF5202	0.51	-0.5
63,125	+		GFF5202	0.51	-0.1
63,126	-		GFF5202	0.51	-1.4
63,137	+		GFF5202	0.55	+1.1
63,137	+		GFF5202	0.55	+3.3
63,138	+		GFF5202	0.56	+0.3
63,138	-		GFF5202	0.56	-1.0
63,230	-		GFF5202	0.89	-2.0
63,230	-		GFF5202	0.89	-1.4
63,230	-		GFF5202	0.89	+0.2
63,230	-		GFF5202	0.89	-0.7
63,280	-				-0.4
63,297	+				+0.6
63,297	+				-0.4
63,297	+				-2.3
63,297	+				-1.8
63,297	+				-0.4
63,297	+				+0.1
63,297	+				+0.4
63,297	+				-2.4
63,297	+				+1.5
63,297	+				-1.2
63,298	-				+0.1
63,298	-				+0.8
63,298	-				-0.1
63,298	-				-1.4
63,298	-				-0.5
63,298	-				-1.4
63,298	-				-1.0
63,298	-				+2.4
63,298	-				-1.6
63,299	+				-0.1
63,299	+				-2.0
63,299	+				+0.6
63,299	+				-0.2
63,299	+				-0.2
63,299	+				-2.1
63,299	+				-1.8
63,300	-				-3.3
63,300	-				+2.1
63,300	-				+1.6
63,300	-				+0.4
63,300	-				+1.5
63,300	-				-2.1
63,300	-				+0.2
63,303	+				-1.4
63,303	+				-1.0
63,303	+				-2.7
63,303	+				-1.0
63,303	+				-3.4
63,303	+				+1.0
63,303	+				+0.1
63,303	+				-1.5
63,303	+				-1.5
63,303	+				-2.2
63,304	-				+0.0
63,304	-				+2.1
63,304	-				-0.5
63,304	-				-2.3
63,304	-				-1.5
63,304	-				-0.0
63,304	-				-0.8
63,304	-				+0.0
63,304	-				+1.2
63,321	+				+0.9
63,347	+				-1.3
63,347	+				+0.3
63,758	+		GFF5203	0.77	+0.2
63,758	+		GFF5203	0.77	-0.7
63,846	+				+0.0
63,846	+				-1.6
63,847	-				+0.2
63,847	-				-2.7
63,847	-				-1.0
63,880	+				-1.0
63,880	+				-1.0
63,881	-				+1.0
63,906	-				+0.6
63,906	-				+0.6