Strain Fitness in Variovorax sp. SCN45 around GFF4793

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
162,580	-				-2.0
162,580	-				-0.3
162,752	+		GFF4792	0.33	-0.6
162,753	-		GFF4792	0.34	-3.4
162,900	-		GFF4792	0.74	+0.2
162,921	-		GFF4792	0.80	-3.1
162,921	-		GFF4792	0.80	-1.6
162,952	+		GFF4792	0.88	-1.3
162,971	+				-0.1
162,971	+				-3.0
162,971	+				+0.4
162,971	+				+0.7
162,971	+				-1.1
162,971	+				+0.7
162,971	+				-1.2
162,972	-				-2.0
162,972	-				-3.3
162,972	-				-1.2
162,972	-				-0.6
162,972	-				+0.1
162,972	-				-0.0
162,972	-				+1.0
162,972	-				-0.9
162,986	+				+0.3
162,986	+				-2.2
162,986	+				+1.3
162,986	+				-0.9
162,986	+				-0.6
162,986	+				+0.7
162,986	+				+1.0
162,986	+				+1.4
162,986	+				+1.0
162,986	+				-0.2
162,986	+				+1.2
162,986	+				-0.5
162,986	+				-0.9
162,986	+				-2.6
162,986	+				-1.1
162,986	+				-2.3
162,986	+				-1.7
162,986	+				-0.6
162,986	+				+0.0
162,986	+				-0.2
162,987	-				+1.2
162,987	-				-1.6
162,987	-				+0.7
162,987	-				+0.5
162,987	-				-0.4
162,987	-				-0.2
162,987	-				+2.7
162,987	-				-0.8
162,987	-				-0.3
162,987	-				+2.4
162,987	-				-0.0
162,987	-				-1.7
162,987	-				-3.2
162,987	-				-4.2
162,987	-				-1.2
162,987	-				-1.2
162,987	-				-1.1
162,987	-				-1.6
162,987	-				-1.4
162,987	-				-1.7
163,223	+				+0.4
163,223	+				+1.7
163,224	-				+0.5
163,224	-				+1.0
163,224	-				-0.1
163,224	-				-1.6
163,380	-		GFF4793	0.16	-0.0
163,541	+		GFF4793	0.28	+0.1
163,542	-		GFF4793	0.28	-2.7
163,553	+		GFF4793	0.29	-0.2
163,553	+		GFF4793	0.29	-0.0
163,553	+		GFF4793	0.29	+1.3
163,553	+		GFF4793	0.29	+0.4
163,583	+		GFF4793	0.31	-0.6
163,583	+		GFF4793	0.31	-1.4
163,584	-		GFF4793	0.31	-2.6
163,607	+		GFF4793	0.33	-1.9
163,607	+		GFF4793	0.33	-0.2
163,607	+		GFF4793	0.33	-1.4
163,607	+		GFF4793	0.33	+1.9
163,608	-		GFF4793	0.33	-0.6
163,655	+		GFF4793	0.36	-1.2
163,655	+		GFF4793	0.36	+0.5
163,655	+		GFF4793	0.36	+3.0
163,655	+		GFF4793	0.36	-1.0
163,781	+		GFF4793	0.45	-2.7
163,925	+		GFF4793	0.56	-1.4
163,925	+		GFF4793	0.56	+0.3
163,925	+		GFF4793	0.56	+3.8
163,925	+		GFF4793	0.56	-2.6
163,925	+		GFF4793	0.56	+1.1
163,926	-		GFF4793	0.56	+0.1
164,075	+		GFF4793	0.67	+1.3
164,432	+				-3.6
164,432	+				-0.4
164,432	+				+0.4
164,432	+				-1.6
164,432	+				+2.3
164,432	+				-2.3
164,433	-				-2.8
164,433	-				+0.4
164,605	-				-0.5
164,676	+		GFF4794	0.17	+0.6
164,676	+		GFF4794	0.17	-3.3
164,677	-		GFF4794	0.17	-0.6
164,677	-		GFF4794	0.17	+0.7
164,677	-		GFF4794	0.17	-1.7
164,677	-		GFF4794	0.17	-2.7
164,730	+		GFF4794	0.23	+1.9
164,731	-		GFF4794	0.23	-0.2
164,904	+		GFF4794	0.43	-0.4
164,904	+		GFF4794	0.43	+1.3
164,905	-		GFF4794	0.43	+0.4
164,905	-		GFF4794	0.43	-2.5
164,905	-		GFF4794	0.43	-1.4
165,066	+		GFF4794	0.61	+2.6
165,135	+		GFF4794	0.69	+0.4
165,135	+		GFF4794	0.69	-1.3
165,135	+		GFF4794	0.69	-0.5
165,135	+		GFF4794	0.69	-2.0
165,135	+		GFF4794	0.69	-2.5
165,135	+		GFF4794	0.69	-1.7
165,135	+		GFF4794	0.69	-3.9
165,135	+		GFF4794	0.69	-0.1
165,135	+		GFF4794	0.69	+1.2
165,135	+		GFF4794	0.69	-2.5
165,135	+		GFF4794	0.69	+1.1
165,136	-		GFF4794	0.69	+0.6
165,136	-		GFF4794	0.69	-2.6
165,136	-		GFF4794	0.69	-0.2
165,136	-		GFF4794	0.69	-0.6
165,136	-		GFF4794	0.69	+0.2
165,136	-		GFF4794	0.69	-1.2
165,289	-		GFF4794	0.87	-0.6
165,289	-		GFF4794	0.87	+2.4
165,289	-		GFF4794	0.87	+3.1
165,357	+				-1.3
165,357	+				+0.3
165,357	+				+2.2
165,358	-				-1.4