Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4237 and GFF4238 are separated by 19 nucleotides GFF4238 and GFF4239 are separated by 110 nucleotides
GFF4237 - no description, at 147,627 to 148,724
GFF4237
GFF4238 - no description, at 148,744 to 149,880
GFF4238
GFF4239 - Mll5186 protein, at 149,991 to 150,965
GFF4239
Position (kb) 148
149
150 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 147.823 kb on - strand, within GFF4237 at 147.823 kb on - strand, within GFF4237 at 147.954 kb on + strand, within GFF4237 at 147.954 kb on + strand, within GFF4237 at 147.955 kb on - strand, within GFF4237 at 148.248 kb on + strand, within GFF4237 at 148.422 kb on + strand, within GFF4237 at 148.723 kb on - strand at 148.751 kb on + strand at 148.751 kb on + strand at 148.751 kb on + strand at 148.752 kb on - strand at 148.752 kb on - strand at 148.752 kb on - strand at 148.752 kb on - strand at 149.183 kb on - strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.254 kb on + strand, within GFF4238 at 149.255 kb on - strand, within GFF4238 at 149.255 kb on - strand, within GFF4238 at 149.255 kb on - strand, within GFF4238 at 149.275 kb on + strand, within GFF4238 at 149.276 kb on - strand, within GFF4238 at 149.276 kb on - strand, within GFF4238 at 149.414 kb on - strand, within GFF4238 at 149.414 kb on - strand, within GFF4238 at 149.534 kb on - strand, within GFF4238 at 149.743 kb on + strand, within GFF4238 at 149.744 kb on - strand, within GFF4238 at 149.744 kb on - strand, within GFF4238 at 149.744 kb on - strand, within GFF4238 at 149.744 kb on - strand, within GFF4238 at 149.744 kb on - strand, within GFF4238 at 149.744 kb on - strand, within GFF4238 at 149.842 kb on + strand at 149.843 kb on - strand at 149.843 kb on - strand at 149.963 kb on + strand at 149.964 kb on - strand at 149.967 kb on + strand at 149.967 kb on + strand at 149.968 kb on - strand at 149.973 kb on + strand at 149.974 kb on - strand at 149.974 kb on - strand at 150.083 kb on - strand at 150.083 kb on - strand at 150.083 kb on - strand at 150.163 kb on + strand, within GFF4239 at 150.163 kb on + strand, within GFF4239 at 150.163 kb on + strand, within GFF4239 at 150.163 kb on + strand, within GFF4239 at 150.163 kb on + strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.164 kb on - strand, within GFF4239 at 150.430 kb on + strand, within GFF4239 at 150.430 kb on + strand, within GFF4239 at 150.430 kb on + strand, within GFF4239 at 150.430 kb on + strand, within GFF4239 at 150.431 kb on - strand, within GFF4239 at 150.431 kb on - strand, within GFF4239 at 150.431 kb on - strand, within GFF4239 at 150.650 kb on - strand, within GFF4239 at 150.650 kb on - strand, within GFF4239
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 147,823 - GFF4237 0.18 +2.0 147,823 - GFF4237 0.18 +0.4 147,954 + GFF4237 0.30 -1.4 147,954 + GFF4237 0.30 +0.9 147,955 - GFF4237 0.30 +0.1 148,248 + GFF4237 0.57 +1.6 148,422 + GFF4237 0.72 -1.7 148,723 - +1.4 148,751 + -2.3 148,751 + +0.6 148,751 + -2.0 148,752 - -0.9 148,752 - +0.0 148,752 - +1.0 148,752 - -0.5 149,183 - GFF4238 0.39 +1.4 149,254 + GFF4238 0.45 +0.1 149,254 + GFF4238 0.45 -0.5 149,254 + GFF4238 0.45 -2.6 149,254 + GFF4238 0.45 +0.2 149,254 + GFF4238 0.45 -2.1 149,254 + GFF4238 0.45 -1.3 149,255 - GFF4238 0.45 -0.1 149,255 - GFF4238 0.45 -1.9 149,255 - GFF4238 0.45 -0.5 149,275 + GFF4238 0.47 -1.2 149,276 - GFF4238 0.47 +0.3 149,276 - GFF4238 0.47 +0.2 149,414 - GFF4238 0.59 -1.4 149,414 - GFF4238 0.59 +0.9 149,534 - GFF4238 0.69 +1.6 149,743 + GFF4238 0.88 +0.8 149,744 - GFF4238 0.88 -0.3 149,744 - GFF4238 0.88 +0.8 149,744 - GFF4238 0.88 -0.6 149,744 - GFF4238 0.88 +0.7 149,744 - GFF4238 0.88 +0.7 149,744 - GFF4238 0.88 -0.1 149,842 + -1.3 149,843 - -0.2 149,843 - -0.0 149,963 + -0.9 149,964 - -0.1 149,967 + +0.9 149,967 + +0.5 149,968 - +0.6 149,973 + +2.7 149,974 - -1.1 149,974 - -1.2 150,083 - +2.5 150,083 - -4.3 150,083 - -1.6 150,163 + GFF4239 0.18 -0.3 150,163 + GFF4239 0.18 -3.6 150,163 + GFF4239 0.18 +2.4 150,163 + GFF4239 0.18 -0.6 150,163 + GFF4239 0.18 -2.1 150,164 - GFF4239 0.18 -0.3 150,164 - GFF4239 0.18 +2.2 150,164 - GFF4239 0.18 -1.1 150,164 - GFF4239 0.18 -1.1 150,164 - GFF4239 0.18 +0.1 150,430 + GFF4239 0.45 -2.2 150,430 + GFF4239 0.45 -2.9 150,430 + GFF4239 0.45 -3.6 150,430 + GFF4239 0.45 -1.3 150,431 - GFF4239 0.45 -1.5 150,431 - GFF4239 0.45 +0.3 150,431 - GFF4239 0.45 -0.9 150,650 - GFF4239 0.68 +1.2 150,650 - GFF4239 0.68 +1.1
Or see this region's nucleotide sequence