Strain Fitness in Variovorax sp. SCN45 around GFF4102

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
2,714	+		GFF4101	0.48	+0.9
2,715	-		GFF4101	0.48	-1.1
2,715	-		GFF4101	0.48	-1.3
3,024	-		GFF4101	0.66	-1.0
3,055	+		GFF4101	0.68	-0.9
3,144	-		GFF4101	0.73	+0.0
4,428	-		GFF4102	0.48	-4.0
4,645	+		GFF4102	0.61	-4.2
4,646	-		GFF4102	0.61	-1.6
4,646	-		GFF4102	0.61	+0.8
4,646	-		GFF4102	0.61	-1.3
5,666	+		GFF4103	0.10	+0.5
5,820	-		GFF4103	0.18	+1.5
6,072	-		GFF4103	0.29	-3.7