Strain Fitness in Variovorax sp. SCN45 around GFF2134

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
183,254	+				-1.6
183,254	+				+0.9
183,254	+				-2.6
183,254	+				-1.4
183,254	+				+3.8
183,254	+				-2.9
183,254	+				+1.9
183,255	-				+1.4
183,255	-				+0.1
183,255	-				-0.6
183,255	-				-1.8
183,255	-				+1.2
183,255	-				-0.0
183,255	-				+0.5
183,261	+				-1.9
183,261	+				-1.3
183,261	+				-1.3
183,261	+				+0.6
183,262	-				+0.7
183,262	-				-2.9
183,262	-				-1.1
183,262	-				+0.6
183,383	-				-2.4
183,649	+		GFF2134	0.36	-2.2
183,812	-		GFF2134	0.55	-0.2
184,090	+		GFF2134	0.86	-3.6
184,198	+				-1.0
184,198	+				-3.0
184,198	+				-4.1
184,199	-				+0.9
184,199	-				-2.7
184,292	-		GFF2135	0.15	+1.4
184,292	-		GFF2135	0.15	-0.1
184,741	+		GFF2136	0.12	-2.6
184,742	-		GFF2136	0.12	-1.6
185,004	-		GFF2136	0.39	+0.6
185,203	+		GFF2136	0.60	-0.0
185,204	-		GFF2136	0.60	-0.9
185,204	-		GFF2136	0.60	-1.0