Strain Fitness in Variovorax sp. SCN45 around GFF1585

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
182,876	+		GFF1584	0.10	-1.6
183,246	+		GFF1584	0.53	+1.4
183,247	-		GFF1584	0.53	+1.8
183,301	-		GFF1584	0.59	-0.6
183,301	-		GFF1584	0.59	-0.2
183,442	-		GFF1584	0.75	-1.7
183,442	-		GFF1584	0.75	+1.3
183,442	-		GFF1584	0.75	-2.7
183,612	+				-0.9
183,612	+				-1.8
183,663	-				+0.8
183,663	-				+2.2
184,294	-		GFF1585	0.38	-4.1
184,395	+		GFF1585	0.46	-1.7
184,396	-		GFF1585	0.46	+0.5
184,396	-		GFF1585	0.46	+0.0
184,396	-		GFF1585	0.46	-2.5
184,425	+		GFF1585	0.49	-2.6
184,426	-		GFF1585	0.49	-2.3
184,426	-		GFF1585	0.49	-0.2
184,440	+		GFF1585	0.50	+1.0
184,441	-		GFF1585	0.50	+0.1
184,441	-		GFF1585	0.50	-3.4
184,441	-		GFF1585	0.50	-0.7
184,596	+		GFF1585	0.63	-2.0
184,596	+		GFF1585	0.63	+0.5
184,597	-		GFF1585	0.63	-1.2
184,648	-		GFF1585	0.67	+0.6
184,727	+		GFF1585	0.74	+2.0
184,728	-		GFF1585	0.74	+0.2
184,806	+		GFF1585	0.80	+0.7
184,807	-		GFF1585	0.80	-2.6
184,807	-		GFF1585	0.80	+0.8
184,821	+		GFF1585	0.81	-0.2
184,884	+		GFF1585	0.86	-2.3
184,884	+		GFF1585	0.86	+1.0
184,885	-		GFF1585	0.87	-0.2
184,885	-		GFF1585	0.87	-1.1
184,885	-		GFF1585	0.87	-3.1
184,917	+		GFF1585	0.89	-3.4
184,917	+		GFF1585	0.89	-0.0
184,918	-		GFF1585	0.89	-0.2
185,020	-				+0.2
185,212	+		GFF1586	0.15	+1.8
185,404	+		GFF1586	0.34	-0.8
185,404	+		GFF1586	0.34	-0.8
185,549	+		GFF1586	0.48	-2.9
185,550	-		GFF1586	0.48	+1.7