Strain Fitness in Variovorax sp. SCN45 around GFF7199

Experiment: Community=Kojac gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=1
16,592	-		GFF7198	0.41	+1.8
16,592	-		GFF7198	0.41	-0.1
16,633	+		GFF7198	0.44	-0.8
16,633	+		GFF7198	0.44	-0.6
16,645	+		GFF7198	0.45	-0.8
16,645	+		GFF7198	0.45	-1.0
16,669	+		GFF7198	0.46	+0.0
16,723	+		GFF7198	0.50	-0.2
16,724	-		GFF7198	0.50	-1.0
16,765	+		GFF7198	0.53	+0.6
16,765	+		GFF7198	0.53	-0.6
16,766	-		GFF7198	0.53	+2.0
16,907	-		GFF7198	0.62	-0.0
16,907	-		GFF7198	0.62	-2.9
16,907	-		GFF7198	0.62	-0.4
17,188	+		GFF7198	0.80	+0.5
17,499	+				-1.0
17,500	-				+0.6
17,508	+				-0.6
17,508	+				-1.0
17,509	-				-0.3
17,509	-				+0.8
17,860	-		GFF7199	0.35	-1.8
17,860	-		GFF7199	0.35	-0.9
18,120	+		GFF7199	0.58	-1.6
18,121	-		GFF7199	0.58	-0.2
18,121	-		GFF7199	0.58	-0.7
18,475	-				-0.8
18,513	+				-0.7
18,513	+				-0.7
18,513	+				+0.3
18,949	+		GFF7200	0.42	+0.2
18,949	+		GFF7200	0.42	-0.7
18,950	-		GFF7200	0.42	-0.3
18,950	-		GFF7200	0.42	-1.1
18,950	-		GFF7200	0.42	-0.1
19,045	+		GFF7200	0.53	-0.9
19,046	-		GFF7200	0.53	+0.2
19,144	+		GFF7200	0.65	-0.6
19,144	+		GFF7200	0.65	+0.1
19,144	+		GFF7200	0.65	+0.6
19,144	+		GFF7200	0.65	-0.6
19,144	+		GFF7200	0.65	-1.8
19,144	+		GFF7200	0.65	-0.4
19,144	+		GFF7200	0.65	-0.3
19,145	-		GFF7200	0.65	-1.6
19,145	-		GFF7200	0.65	-0.3
19,145	-		GFF7200	0.65	-0.6
19,145	-		GFF7200	0.65	-0.2
19,145	-		GFF7200	0.65	-1.8
19,151	-		GFF7200	0.66	-1.8
19,291	+		GFF7200	0.82	-1.1
19,292	-		GFF7200	0.82	-0.3