Strain Fitness in Variovorax sp. SCN45 around GFF7184

Experiment: Community=Kojac gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=1
940	-		GFF7183	0.12	+0.0
1,027	-		GFF7183	0.25	-0.5
1,036	-		GFF7183	0.26	+0.1
1,077	+		GFF7183	0.32	-0.4
1,078	-		GFF7183	0.32	-0.1
1,078	-		GFF7183	0.32	+0.2
1,086	+		GFF7183	0.34	-0.8
1,221	+		GFF7183	0.54	-0.2
1,524	-				-0.6
1,524	-				-1.0
1,768	-				-0.6
1,804	-				+0.0
1,804	-				-1.1
1,804	-				-0.6
1,978	-				-0.2
1,988	+		GFF7184	0.11	-1.4
1,989	-		GFF7184	0.11	-0.8
2,118	+		GFF7184	0.34	-0.0
2,225	-		GFF7184	0.54	-0.3
2,225	-		GFF7184	0.54	-0.8
2,671	-				-0.3
2,671	-				-1.8
2,699	-				-1.4
2,706	+				-0.2
2,707	-				+1.6
2,707	-				-1.0
2,707	-				-0.2
2,745	+				-0.5
2,909	+				+0.3
2,910	-				-0.6
2,910	-				-0.1
2,910	-				-0.3
2,910	-				-0.6
3,030	-				-0.7
3,082	+				-1.3
3,099	+				+1.6
3,099	+				+0.0
3,297	+		GFF7185	0.54	-0.8
3,297	+		GFF7185	0.54	+1.6
3,298	-		GFF7185	0.54	+1.0
3,298	-		GFF7185	0.54	-0.9
3,300	-		GFF7185	0.55	-0.8
3,396	+		GFF7185	0.83	-0.4
3,398	+		GFF7185	0.84	-1.2
3,399	-		GFF7185	0.84	-0.2