Strain Fitness in Variovorax sp. SCN45 around GFF6924

Experiment: Community=Kojac gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=1
2,328	+		GFF6923	0.42	-0.1
2,329	-		GFF6923	0.42	-0.4
2,715	+		GFF6923	0.64	-0.3
2,715	+		GFF6923	0.64	-0.3
2,715	+		GFF6923	0.64	-0.7
2,715	+		GFF6923	0.64	+0.1
2,715	+		GFF6923	0.64	-1.3
2,716	-		GFF6923	0.65	-0.3
2,716	-		GFF6923	0.65	-2.0
2,716	-		GFF6923	0.65	-0.4
2,757	+		GFF6923	0.67	-0.4
2,817	+		GFF6923	0.70	+0.7
2,818	-		GFF6923	0.70	+1.0
2,982	+		GFF6923	0.80	-0.6
2,982	+		GFF6923	0.80	-0.6
2,983	-		GFF6923	0.80	-1.7
2,997	+		GFF6923	0.81	-0.5
3,051	+		GFF6923	0.84	-2.5
3,052	-		GFF6923	0.84	-0.5
3,052	-		GFF6923	0.84	-0.6
3,052	-		GFF6923	0.84	+0.2
3,109	-		GFF6923	0.87	-0.3
3,109	-		GFF6923	0.87	-0.7
3,109	-		GFF6923	0.87	-1.3
3,109	-		GFF6923	0.87	-0.0
3,404	+		GFF6924	0.24	-1.8
3,404	+		GFF6924	0.24	+0.2
3,405	-		GFF6924	0.24	+0.1
3,405	-		GFF6924	0.24	-0.5
3,407	+		GFF6924	0.25	+0.2
3,407	+		GFF6924	0.25	+0.3
3,408	-		GFF6924	0.25	-1.3
3,408	-		GFF6924	0.25	+0.7
3,408	-		GFF6924	0.25	+0.1
3,536	+		GFF6924	0.65	+0.2
3,803	+				-0.3
3,804	-				-0.8
3,980	+		GFF6925	0.11	-0.6
4,109	+		GFF6925	0.17	-0.1
4,109	+		GFF6925	0.17	+0.0
4,193	+		GFF6925	0.22	-0.3
4,193	+		GFF6925	0.22	-0.1
4,194	-		GFF6925	0.22	-1.0
4,194	-		GFF6925	0.22	+0.5
4,194	-		GFF6925	0.22	-0.4
4,194	-		GFF6925	0.22	-0.1
4,194	-		GFF6925	0.22	+0.9
4,194	-		GFF6925	0.22	-1.1
4,194	-		GFF6925	0.22	+0.3
4,566	-		GFF6925	0.40	-0.6