Strain Fitness in Variovorax sp. SCN45 around GFF6825

Experiment: Community=Kojac gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=1
10,248	+		GFF6824	0.75	-1.1
10,248	+		GFF6824	0.75	+0.2
10,249	-		GFF6824	0.75	-0.3
10,376	+		GFF6824	0.89	-0.4
10,377	-		GFF6824	0.89	-0.8
10,931	-		GFF6825	0.37	+0.1
10,990	+		GFF6825	0.42	-0.1
10,991	-		GFF6825	0.42	+1.7
10,991	-		GFF6825	0.42	-0.7
10,991	-		GFF6825	0.42	-1.4
11,272	+		GFF6825	0.65	-0.7
11,272	+		GFF6825	0.65	-1.4
11,272	+		GFF6825	0.65	-0.3
11,272	+		GFF6825	0.65	+0.7
11,272	+		GFF6825	0.65	-0.2
11,273	-		GFF6825	0.65	-0.1
11,273	-		GFF6825	0.65	-0.7
11,273	-		GFF6825	0.65	-0.9
11,622	+				-1.7
11,622	+				+0.4
11,623	-				+1.3
11,717	+				+0.1
11,723	+				+0.4
11,725	+				-1.0
11,725	+				+0.8
11,726	-				+0.3
11,726	-				+1.5
11,726	-				+1.3
11,734	+				-0.3
12,439	+		GFF6826	0.75	+1.0
12,439	+		GFF6826	0.75	+0.9
12,440	-		GFF6826	0.75	+0.3
12,644	-				-0.8