Strain Fitness in Variovorax sp. SCN45 around GFF5912

Experiment: Community=Kojac gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=1
126,407	+		GFF5911	0.30	-0.7
126,516	-		GFF5911	0.38	-0.3
126,516	-		GFF5911	0.38	+0.7
126,659	+		GFF5911	0.49	-2.0
126,660	-		GFF5911	0.49	+0.9
126,701	+		GFF5911	0.52	-0.3
126,702	-		GFF5911	0.52	+0.1
126,702	-		GFF5911	0.52	+0.0
126,702	-		GFF5911	0.52	+0.1
126,704	+		GFF5911	0.53	-1.9
126,704	+		GFF5911	0.53	+0.1
126,705	-		GFF5911	0.53	-0.1
126,764	+		GFF5911	0.57	-1.3
126,764	+		GFF5911	0.57	-0.1
126,833	+		GFF5911	0.62	+0.4
126,834	-		GFF5911	0.62	+0.1
126,834	-		GFF5911	0.62	-0.5
126,917	+		GFF5911	0.69	-1.3
126,917	+		GFF5911	0.69	-0.5
126,918	-		GFF5911	0.69	-1.4
126,918	-		GFF5911	0.69	+0.3
126,918	-		GFF5911	0.69	-2.0
127,169	+		GFF5911	0.88	-0.7
127,169	+		GFF5911	0.88	-1.3
127,169	+		GFF5911	0.88	+1.1
127,169	+		GFF5911	0.88	-1.7
127,170	-		GFF5911	0.88	+0.0
127,649	+		GFF5912	0.46	-0.8
127,649	+		GFF5912	0.46	+0.5
127,650	-		GFF5912	0.46	+0.7
127,703	+		GFF5912	0.54	-0.7
127,703	+		GFF5912	0.54	-0.7
127,704	-		GFF5912	0.54	-0.5
127,704	-		GFF5912	0.54	+0.2
127,704	-		GFF5912	0.54	-1.4
128,046	+				-0.2
128,062	+				-1.0
128,063	-				+0.3
128,110	-				-0.2
128,294	-				-0.2
128,626	+		GFF5913	0.28	-2.2
128,663	-		GFF5913	0.30	+1.6
128,663	-		GFF5913	0.30	-1.0
128,785	+		GFF5913	0.40	+0.1
128,786	-		GFF5913	0.40	-1.2
128,884	+		GFF5913	0.47	+0.7