Strain Fitness in Variovorax sp. SCN45 around GFF5738

Experiment: Community=Kojac gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=1
112,219	-		GFF5737	0.34	-1.2
112,219	-		GFF5737	0.34	-0.2
113,403	+		GFF5738	0.55	+0.3
113,442	+		GFF5738	0.60	+0.5
113,443	-		GFF5738	0.60	-0.4
113,798	+		GFF5739	0.16	-1.0
113,799	-		GFF5739	0.16	+0.4
114,038	-				+1.0
114,041	+				-1.6
114,041	+				+0.3
114,041	+				-0.5
114,042	-				-0.4
114,043	+				-0.8
114,043	+				-0.2
114,043	+				-0.0
114,043	+				-1.0
114,043	+				-1.0
114,043	+				+0.3
114,044	-				-0.6
114,044	-				+0.1
114,044	-				+1.6
114,044	-				-0.8
114,044	-				+0.2
114,437	-		GFF5740	0.53	-0.7
114,448	+		GFF5740	0.54	+0.6