Strain Fitness in Variovorax sp. SCN45 around GFF4199

Experiment: Community=Kojac gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=1
113,384	+		GFF4198	0.11	-0.4
113,504	+		GFF4198	0.22	-0.2
113,700	-		GFF4198	0.40	-1.0
113,711	+		GFF4198	0.41	-0.8
113,715	-		GFF4198	0.42	-0.3
113,985	-		GFF4198	0.66	-0.6
114,009	-		GFF4198	0.68	-0.9
114,198	-		GFF4198	0.86	-0.2
114,198	-		GFF4198	0.86	+0.6
114,851	+		GFF4199	0.51	-1.1
114,852	-		GFF4199	0.51	-0.4
114,863	+		GFF4199	0.52	-1.9
114,863	+		GFF4199	0.52	-1.0
114,863	+		GFF4199	0.52	-1.0
114,863	+		GFF4199	0.52	-1.1
114,864	-		GFF4199	0.52	-0.0
115,833	+		GFF4200	0.43	-0.6
115,833	+		GFF4200	0.43	+2.1
115,833	+		GFF4200	0.43	+0.3
115,833	+		GFF4200	0.43	+0.1
115,833	+		GFF4200	0.43	-0.2
115,834	-		GFF4200	0.43	-1.0
115,834	-		GFF4200	0.43	-0.4
115,834	-		GFF4200	0.43	-0.3
115,834	-		GFF4200	0.43	-0.1
115,834	-		GFF4200	0.43	-0.5
115,847	+		GFF4200	0.44	+1.4
115,847	+		GFF4200	0.44	-0.0