Strain Fitness in Variovorax sp. SCN45 around GFF2671

Experiment: Community=Kojac gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Kojac gum; Passage=1
92,173	+		GFF2669	0.36	-0.3
92,173	+		GFF2669	0.36	-0.5
92,173	+		GFF2669	0.36	-1.1
92,173	+		GFF2669	0.36	-0.2
92,174	-		GFF2669	0.36	+0.3
92,973	+		GFF2670	0.41	-0.0
93,362	+		GFF2671	0.20	+0.8
93,362	+		GFF2671	0.20	+1.0
93,362	+		GFF2671	0.20	-0.0
93,363	-		GFF2671	0.20	-1.2
94,011	+		GFF2671	0.76	+0.7
94,011	+		GFF2671	0.76	-1.1
94,012	-		GFF2671	0.76	-0.1
94,012	-		GFF2671	0.76	-0.0
94,012	-		GFF2671	0.76	-0.5
94,140	+		GFF2671	0.87	-0.9
94,140	+		GFF2671	0.87	-0.5
94,141	-		GFF2671	0.87	+0.7
94,141	-		GFF2671	0.87	-0.1
94,167	+		GFF2671	0.89	-0.6
94,167	+		GFF2671	0.89	-1.1
94,167	+		GFF2671	0.89	+1.5
94,168	-		GFF2671	0.89	-0.0
94,168	-		GFF2671	0.89	-0.8
94,168	-		GFF2671	0.89	+0.3
94,168	-		GFF2671	0.89	-0.1
94,634	+		GFF2672	0.36	+0.7
94,634	+		GFF2672	0.36	-1.5
94,634	+		GFF2672	0.36	-0.1
94,635	-		GFF2672	0.37	-0.4
94,635	-		GFF2672	0.37	-0.1
94,646	+		GFF2672	0.38	+0.5
94,647	-		GFF2672	0.38	+0.3
94,647	-		GFF2672	0.38	-0.0
94,647	-		GFF2672	0.38	-0.2
94,647	-		GFF2672	0.38	-0.4
94,950	-		GFF2672	0.71	-0.7
95,180	+				+0.2