Strain Fitness in Variovorax sp. SCN45 around GFF811

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
115,404	+				-1.7
115,404	+				-1.7
115,405	-				-0.2
115,405	-				-0.4
115,405	-				-0.7
115,405	-				-0.5
115,483	+				+1.4
115,483	+				-0.7
115,483	+				-0.2
115,483	+				+0.5
115,483	+				+0.2
115,483	+				-0.2
115,484	-				-0.1
115,484	-				-1.1
115,700	+				+1.7
115,700	+				-0.2
115,700	+				-1.0
115,700	+				-0.5
115,701	-				-0.3
115,701	-				+0.8
115,701	-				-0.2
115,701	-				+0.5
115,701	-				-0.6
115,701	-				-0.2
115,701	-				+0.2
115,718	+				-1.6
115,718	+				+1.4
115,718	+				+0.4
115,718	+				+1.1
115,718	+				-0.7
115,718	+				+0.0
115,718	+				-1.3
115,719	-				+0.3
115,719	-				+0.2
115,719	-				-0.0
115,719	-				-1.3
115,719	-				+0.2
115,719	-				-0.9
115,980	+		GFF810	0.38	-0.5
115,980	+		GFF810	0.38	+2.0
115,980	+		GFF810	0.38	+1.1
115,980	+		GFF810	0.38	-0.2
115,981	-		GFF810	0.38	-0.6
115,981	-		GFF810	0.38	+0.6
115,981	-		GFF810	0.38	-0.4
115,981	-		GFF810	0.38	+0.6
116,244	+		GFF810	0.79	-0.1
116,361	+				-0.6
116,361	+				-0.2
116,361	+				-0.1
116,361	+				+0.1
116,362	-				+0.0
116,362	-				-0.6
116,421	+				-0.4
116,421	+				-0.3
116,421	+				-1.2
116,422	-				-0.6
116,422	-				-2.2
116,423	+				-0.4
116,423	+				+1.4
116,423	+				-0.3
116,423	+				-0.5
116,423	+				+0.4
116,423	+				-0.2
116,424	-				-0.8
116,424	-				-0.9
116,424	-				-0.4
116,424	-				-2.2
116,424	-				+0.2
116,547	+		GFF811	0.16	+0.8
116,547	+		GFF811	0.16	-0.2
116,547	+		GFF811	0.16	+0.6
116,548	-		GFF811	0.16	-0.9
116,548	-		GFF811	0.16	-0.8
116,548	-		GFF811	0.16	+0.4
116,628	+		GFF811	0.26	-0.3
116,628	+		GFF811	0.26	+0.9
116,629	-		GFF811	0.26	-0.3
116,629	-		GFF811	0.26	+0.9
116,629	-		GFF811	0.26	-1.3
116,629	-		GFF811	0.26	-0.6
116,648	+		GFF811	0.28	+0.9
116,648	+		GFF811	0.28	-0.7
116,775	+		GFF811	0.42	-0.7
116,775	+		GFF811	0.42	-0.8
116,775	+		GFF811	0.42	-0.0
116,775	+		GFF811	0.42	-0.6
116,775	+		GFF811	0.42	-0.1
116,775	+		GFF811	0.42	+0.9
116,776	-		GFF811	0.42	-1.3
116,776	-		GFF811	0.42	+0.7
116,776	-		GFF811	0.42	+0.3
116,776	-		GFF811	0.42	-0.3
116,875	-		GFF811	0.54	+0.0
116,875	-		GFF811	0.54	-0.2
116,875	-		GFF811	0.54	-0.5
116,901	+		GFF811	0.57	+0.0
116,901	+		GFF811	0.57	+0.7
116,901	+		GFF811	0.57	-0.5
116,901	+		GFF811	0.57	+0.7
116,901	+		GFF811	0.57	-0.1
116,901	+		GFF811	0.57	-1.1
116,901	+		GFF811	0.57	+0.0
116,901	+		GFF811	0.57	-0.6
116,901	+		GFF811	0.57	+0.7
116,901	+		GFF811	0.57	+0.1
116,901	+		GFF811	0.57	-0.2
116,901	+		GFF811	0.57	+0.7
116,901	+		GFF811	0.57	+3.0
116,901	+		GFF811	0.57	+0.4
116,901	+		GFF811	0.57	+0.4
116,902	-		GFF811	0.57	-0.1
116,902	-		GFF811	0.57	-0.8
116,902	-		GFF811	0.57	+0.1
116,902	-		GFF811	0.57	-1.3
116,902	-		GFF811	0.57	-0.1
116,902	-		GFF811	0.57	-0.8
116,902	-		GFF811	0.57	-0.4
116,902	-		GFF811	0.57	-0.2
116,902	-		GFF811	0.57	-0.6
116,902	-		GFF811	0.57	+0.3
116,902	-		GFF811	0.57	+0.8
116,902	-		GFF811	0.57	-0.8
116,902	-		GFF811	0.57	+0.1
116,902	-		GFF811	0.57	+0.6
116,902	-		GFF811	0.57	-0.1
116,902	-		GFF811	0.57	-0.2
116,907	+		GFF811	0.57	+0.1
116,907	+		GFF811	0.57	-0.4
116,907	+		GFF811	0.57	-1.0
116,907	+		GFF811	0.57	-0.1
116,907	+		GFF811	0.57	+0.5
116,907	+		GFF811	0.57	+0.1
116,907	+		GFF811	0.57	-0.0
116,907	+		GFF811	0.57	-0.3
116,908	-		GFF811	0.57	+0.3
116,908	-		GFF811	0.57	+0.6
116,908	-		GFF811	0.57	-0.1
116,908	-		GFF811	0.57	-2.2
116,908	-		GFF811	0.57	-0.8
116,908	-		GFF811	0.57	+0.1
116,908	-		GFF811	0.57	-0.3
116,908	-		GFF811	0.57	-1.4
116,928	+		GFF811	0.60	+1.0
116,929	-		GFF811	0.60	-0.1
116,929	-		GFF811	0.60	-0.6
116,929	-		GFF811	0.60	-0.3
117,003	+		GFF811	0.68	+0.7
117,004	-		GFF811	0.68	-0.2
117,004	-		GFF811	0.68	+1.4
117,004	-		GFF811	0.68	+0.0
117,021	+		GFF811	0.70	-0.8
117,021	+		GFF811	0.70	-0.0
117,021	+		GFF811	0.70	-0.8
117,021	+		GFF811	0.70	+0.1
117,022	-		GFF811	0.70	-0.1
117,022	-		GFF811	0.70	-1.3
117,022	-		GFF811	0.70	+0.6
117,022	-		GFF811	0.70	+0.4
117,022	-		GFF811	0.70	+1.8
117,054	+		GFF811	0.74	+1.8
117,054	+		GFF811	0.74	-0.1
117,081	+		GFF811	0.77	-0.0
117,082	-		GFF811	0.77	-0.4
117,082	-		GFF811	0.77	+0.4
117,082	-		GFF811	0.77	-0.5
117,082	-		GFF811	0.77	+0.8
117,082	-		GFF811	0.77	+0.8
117,082	-		GFF811	0.77	-0.2
117,114	+		GFF811	0.81	+1.2
117,114	+		GFF811	0.81	-0.5
117,115	-		GFF811	0.81	+0.4
117,115	-		GFF811	0.81	-0.7
117,333	+				+0.4
117,333	+				-1.5
117,333	+				-0.2
117,333	+				-0.5
117,334	-				+0.4
117,334	-				+0.2
117,334	-				+0.7
117,334	-				-1.0
117,334	-				+0.4
117,334	-				+0.0
117,334	-				+0.4
117,334	-				-2.0
117,342	+				-1.5
117,342	+				-0.2
117,342	+				-0.5
117,343	-				-0.4
117,343	-				+0.6
117,378	+		GFF812	0.12	+0.5
117,378	+		GFF812	0.12	-0.4
117,378	+		GFF812	0.12	+0.1
117,378	+		GFF812	0.12	+0.2
117,378	+		GFF812	0.12	-0.4
117,378	+		GFF812	0.12	-1.2
117,378	+		GFF812	0.12	+0.7
117,378	+		GFF812	0.12	+1.4
117,379	-		GFF812	0.12	+0.0
117,379	-		GFF812	0.12	-0.6
117,379	-		GFF812	0.12	-0.1
117,379	-		GFF812	0.12	-0.1
117,379	-		GFF812	0.12	-0.9
117,379	-		GFF812	0.12	-0.2
117,379	-		GFF812	0.12	-1.4
117,379	-		GFF812	0.12	+0.9
117,465	+		GFF812	0.26	-1.2
117,465	+		GFF812	0.26	-0.3
117,465	+		GFF812	0.26	+3.4
117,465	+		GFF812	0.26	+1.2
117,465	+		GFF812	0.26	+0.0
117,465	+		GFF812	0.26	-0.8
117,465	+		GFF812	0.26	-0.0
117,465	+		GFF812	0.26	+0.1
117,465	+		GFF812	0.26	-0.5
117,465	+		GFF812	0.26	-0.6
117,465	+		GFF812	0.26	-0.4
117,466	-		GFF812	0.27	+0.2
117,466	-		GFF812	0.27	-0.9
117,466	-		GFF812	0.27	+0.4
117,466	-		GFF812	0.27	-0.5
117,466	-		GFF812	0.27	-2.5
117,466	-		GFF812	0.27	-0.2
117,466	-		GFF812	0.27	+0.5
117,466	-		GFF812	0.27	-1.2
117,466	-		GFF812	0.27	-0.0
117,466	-		GFF812	0.27	+3.0
117,466	-		GFF812	0.27	-0.3
117,466	-		GFF812	0.27	-0.4
117,466	-		GFF812	0.27	-0.6
117,466	-		GFF812	0.27	-0.6
117,466	-		GFF812	0.27	+1.4
117,466	-		GFF812	0.27	-0.9
117,466	-		GFF812	0.27	-0.7
117,474	+		GFF812	0.28	+0.1
117,474	+		GFF812	0.28	-0.2
117,474	+		GFF812	0.28	-1.0
117,561	+		GFF812	0.43	-1.4
117,561	+		GFF812	0.43	-0.9
117,562	-		GFF812	0.43	+0.6
117,562	-		GFF812	0.43	-0.8
117,562	-		GFF812	0.43	-0.0
117,562	-		GFF812	0.43	-0.3
117,648	+		GFF812	0.57	-0.5
117,648	+		GFF812	0.57	-0.9
117,648	+		GFF812	0.57	+0.2
117,648	+		GFF812	0.57	+0.5
117,649	-		GFF812	0.58	-0.4
117,649	-		GFF812	0.58	+0.2
117,649	-		GFF812	0.58	+0.1
117,649	-		GFF812	0.58	+0.4
117,894	+				-0.7
117,894	+				-0.9
117,983	-				-0.0
117,995	+				-0.9
117,995	+				+1.5
118,157	+				+0.1
118,158	-				+0.2
118,158	-				+0.3
118,194	-				-0.4
118,242	+				-0.1
118,242	+				-0.9
118,242	+				-1.8
118,243	-				+0.4
118,243	-				-0.3
118,243	-				-2.3
118,243	-				-0.4
118,246	+				+0.6
118,246	+				-2.3
118,246	+				+0.1
118,247	-				+0.2
118,248	+				+0.2