Strain Fitness in Variovorax sp. SCN45 around GFF807

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
110,110	+		GFF805	0.65	+0.8
110,110	+		GFF805	0.65	+0.4
110,110	+		GFF805	0.65	+0.0
110,110	+		GFF805	0.65	-0.4
110,111	-		GFF805	0.65	-1.6
110,111	-		GFF805	0.65	-0.1
110,111	-		GFF805	0.65	-0.7
110,111	-		GFF805	0.65	-1.8
110,248	+		GFF805	0.80	-0.9
110,411	+				+0.0
110,411	+				-0.7
110,411	+				-0.2
110,411	+				+0.9
110,412	-				-0.4
110,412	-				-0.4
110,412	-				-0.4
110,412	-				-0.7
110,412	-				-0.3
110,412	-				-0.4
110,412	-				-0.2
110,442	+				-0.2
110,442	+				-1.4
110,442	+				-0.0
110,442	+				+0.3
110,442	+				+0.6
110,443	-				+0.4
110,443	-				-0.1
110,443	-				-0.1
110,468	+				-0.1
110,468	+				+1.4
110,468	+				-0.5
110,468	+				-0.7
110,468	+				-0.3
110,468	+				-0.9
110,468	+				-0.9
110,469	-				-1.1
110,472	+				-0.3
110,472	+				+0.7
110,472	+				-0.3
110,472	+				-1.3
110,473	-				-1.5
110,473	-				+0.4
110,473	-				-0.2
110,473	-				+1.2
110,473	-				+0.1
110,532	+		GFF806	0.12	+0.1
110,532	+		GFF806	0.12	-1.4
110,532	+		GFF806	0.12	-0.1
110,538	+		GFF806	0.13	+0.1
110,538	+		GFF806	0.13	-1.5
110,538	+		GFF806	0.13	-1.6
110,538	+		GFF806	0.13	-0.2
110,538	+		GFF806	0.13	-0.6
110,538	+		GFF806	0.13	+0.1
110,538	+		GFF806	0.13	-0.2
110,538	+		GFF806	0.13	-0.4
110,538	+		GFF806	0.13	-1.4
110,539	-		GFF806	0.13	-1.2
110,539	-		GFF806	0.13	+0.7
110,539	-		GFF806	0.13	-0.2
110,539	-		GFF806	0.13	-0.7
110,539	-		GFF806	0.13	-0.1
110,539	-		GFF806	0.13	+1.4
110,539	-		GFF806	0.13	-0.6
110,583	+		GFF806	0.20	-0.1
110,584	-		GFF806	0.20	-0.1
110,584	-		GFF806	0.20	-0.6
110,667	+		GFF806	0.33	+1.6
110,667	+		GFF806	0.33	-1.6
110,667	+		GFF806	0.33	-1.4
110,668	-		GFF806	0.33	-0.2
110,668	-		GFF806	0.33	-0.9
110,668	-		GFF806	0.33	+0.2
110,668	-		GFF806	0.33	-0.2
110,668	-		GFF806	0.33	-1.9
110,796	+		GFF806	0.53	-0.1
110,796	+		GFF806	0.53	+1.4
110,796	+		GFF806	0.53	+1.1
110,796	+		GFF806	0.53	-1.1
110,796	+		GFF806	0.53	+0.4
110,797	-		GFF806	0.53	+0.3
110,797	-		GFF806	0.53	-0.5
110,797	-		GFF806	0.53	+1.1
110,913	+		GFF806	0.71	+0.5
110,913	+		GFF806	0.71	+0.5
110,913	+		GFF806	0.71	-0.2
110,913	+		GFF806	0.71	-0.2
110,913	+		GFF806	0.71	+0.2
110,913	+		GFF806	0.71	-1.6
110,913	+		GFF806	0.71	+0.4
110,914	-		GFF806	0.72	+0.2
110,914	-		GFF806	0.72	-0.4
110,914	-		GFF806	0.72	-1.2
110,914	-		GFF806	0.72	+0.3
110,914	-		GFF806	0.72	-0.5
110,914	-		GFF806	0.72	-0.8
110,914	-		GFF806	0.72	-0.3
110,914	-		GFF806	0.72	-0.6
110,914	-		GFF806	0.72	+0.2
110,914	-		GFF806	0.72	-0.0
110,914	-		GFF806	0.72	-0.3
110,914	-		GFF806	0.72	-0.4
110,914	-		GFF806	0.72	-1.0
111,195	-		GFF807	0.12	-0.5
111,195	-		GFF807	0.12	-1.2
111,466	-		GFF807	0.48	-0.6
111,466	-		GFF807	0.48	-0.5
111,949	+				-1.0
111,949	+				-0.1
111,949	+				-0.7
111,950	-				-0.4
111,950	-				+0.4
111,950	-				-0.1
111,960	+				+0.5
111,960	+				+0.1
111,960	+				+2.1
111,961	-				+0.2
111,961	-				-1.2
111,961	-				+0.5
111,990	+				-1.5
112,071	+				+0.9
112,072	-				-0.6
112,072	-				+0.0
112,072	-				-0.6
112,072	-				-0.2
112,072	-				+1.1
112,072	-				-0.6
112,072	-				+1.1
112,072	-				-0.7
112,099	+				-1.0
112,099	+				+0.8
112,099	+				-1.7
112,100	-				-0.9
112,100	-				-0.6
112,100	-				+0.0
112,164	-				+1.6
112,164	-				+1.8
112,164	-				-0.2
112,448	+		GFF808	0.13	+0.1
112,448	+		GFF808	0.13	-0.3
112,448	+		GFF808	0.13	-0.2
112,448	+		GFF808	0.13	-0.4
112,448	+		GFF808	0.13	-1.0
112,448	+		GFF808	0.13	-0.7
112,448	+		GFF808	0.13	+0.0
112,448	+		GFF808	0.13	-0.9
112,448	+		GFF808	0.13	-0.2
112,448	+		GFF808	0.13	-0.1
112,448	+		GFF808	0.13	-0.8
112,449	-		GFF808	0.13	+0.7
112,449	-		GFF808	0.13	-0.7
112,449	-		GFF808	0.13	+0.1
112,449	-		GFF808	0.13	+0.1
112,449	-		GFF808	0.13	-0.2
112,449	-		GFF808	0.13	-1.8
112,568	+		GFF808	0.20	+1.4
112,568	+		GFF808	0.20	-1.3
112,568	+		GFF808	0.20	-0.8
112,569	-		GFF808	0.20	-0.4
112,569	-		GFF808	0.20	-1.1