Strain Fitness in Variovorax sp. SCN45 around GFF7361

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
8,014	+		GFF7360	0.22	+0.8
8,015	-		GFF7360	0.22	-0.3
8,015	-		GFF7360	0.22	-0.6
8,015	-		GFF7360	0.22	-0.7
8,137	+		GFF7360	0.33	+0.4
8,137	+		GFF7360	0.33	-0.1
8,138	-		GFF7360	0.33	-0.6
8,138	-		GFF7360	0.33	+0.3
8,197	+		GFF7360	0.38	-0.2
8,197	+		GFF7360	0.38	-0.5
8,198	-		GFF7360	0.38	-0.5
8,363	+		GFF7360	0.53	-0.1
8,364	-		GFF7360	0.53	-1.0
8,426	-		GFF7360	0.58	-0.2
8,627	+		GFF7360	0.76	+1.0
8,628	-		GFF7360	0.76	-1.2
8,690	-		GFF7360	0.81	-0.0
8,694	+		GFF7360	0.82	+0.2
8,749	+		GFF7360	0.87	+0.2
8,749	+		GFF7360	0.87	+0.1
8,843	-				-1.1
8,913	+				-1.4
8,914	-				+1.9
8,917	-				-0.5
8,969	+				-0.1
9,059	+		GFF7361	0.21	-1.7
9,106	-		GFF7361	0.32	-2.1
9,106	-		GFF7361	0.32	-0.8
9,106	-		GFF7361	0.32	-0.8
9,106	-		GFF7361	0.32	-1.2
9,106	-		GFF7361	0.32	-0.5
9,106	-		GFF7361	0.32	-0.7
9,108	-		GFF7361	0.32	-0.2
9,108	-		GFF7361	0.32	-1.0
9,469	+				-0.3
9,937	+		GFF7362	0.67	+0.3
9,937	+		GFF7362	0.67	-0.1
10,179	+				+0.0
10,179	+				+0.1
10,180	-				-0.6
10,363	-				-0.1
10,367	-				-0.9
10,390	+				-0.4
10,390	+				-0.1
10,390	+				-0.2
10,390	+				+0.0
10,391	-				+0.9
10,391	-				+0.3
10,391	-				-0.6