Strain Fitness in Variovorax sp. SCN45 around GFF7265

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
11,265	-				-0.5
11,340	+				-0.7
11,340	+				-0.8
11,340	+				+0.7
11,453	+		GFF7264	0.15	+0.0
11,794	-		GFF7264	0.55	-1.8
11,794	-		GFF7264	0.55	+1.0
11,970	-		GFF7264	0.76	-0.6
12,126	+				+1.0
12,127	-				-0.0
12,303	+				+0.6
12,513	+		GFF7265	0.29	+0.6
12,514	-		GFF7265	0.29	+1.0
12,540	+		GFF7265	0.31	-0.2
12,540	+		GFF7265	0.31	+0.2
12,688	-		GFF7265	0.45	+0.4
12,837	+		GFF7265	0.58	+0.9
12,838	-		GFF7265	0.58	+0.2
12,943	-		GFF7265	0.67	+0.5
13,229	+				+0.8
13,323	-				-0.6
13,995	+		GFF7266	0.62	-0.3
14,134	-		GFF7266	0.76	+0.1