Strain Fitness in Variovorax sp. SCN45 around GFF7212

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
27,828	-		GFF7211	0.46	+0.3
28,271	+		GFF7211	0.77	+0.0
28,311	+		GFF7211	0.80	+0.1
28,311	+		GFF7211	0.80	+0.7
28,376	+		GFF7211	0.84	-0.9
28,376	+		GFF7211	0.84	+0.1
28,376	+		GFF7211	0.84	+0.1
28,377	-		GFF7211	0.84	-0.1
28,377	-		GFF7211	0.84	+0.8
28,526	+				-0.1
28,544	+				+0.1
28,682	+				-0.8
28,724	-				-0.3
28,782	+				-0.2
28,782	+				+0.3
28,932	+				+1.4
28,932	+				+1.3
29,884	-		GFF7212	0.79	+0.3
30,388	-				+0.4
30,400	+				-0.2
30,401	-				-0.5
30,401	-				-0.1
30,551	-		GFF7213	0.15	-0.4
30,643	+		GFF7213	0.19	+0.1
30,913	+		GFF7213	0.30	-0.1
30,914	-		GFF7213	0.30	-1.1
30,914	-		GFF7213	0.30	-1.4