Strain Fitness in Variovorax sp. SCN45 around GFF7206

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
22,853	+				-0.4
22,854	-				+0.6
22,854	-				-0.3
22,856	+				-0.9
22,857	-				-0.7
22,857	-				-0.4
23,309	+		GFF7204	0.87	-0.7
23,309	+		GFF7204	0.87	-1.0
23,309	+		GFF7204	0.87	+0.6
23,309	+		GFF7204	0.87	-1.6
23,310	-		GFF7204	0.87	-1.2
23,425	+				+0.1
23,426	-				-0.0
23,426	-				-0.8
23,426	-				+0.1
23,426	-				-1.9
23,426	-				-0.1
23,700	+				+0.5
23,701	-				+0.1
23,701	-				-0.8
23,735	+				-0.4
23,735	+				-0.6
23,736	-				-0.9
23,960	+		GFF7206	0.37	-0.6
23,968	-		GFF7206	0.40	-1.5
24,440	+		GFF7207	0.61	+1.1
24,440	+		GFF7207	0.61	-0.4
24,440	+		GFF7207	0.61	-1.1
24,440	+		GFF7207	0.61	-0.4
24,440	+		GFF7207	0.61	+0.0
24,441	-		GFF7207	0.62	-0.2
24,441	-		GFF7207	0.62	+1.1
24,441	-		GFF7207	0.62	+0.7
24,441	-		GFF7207	0.62	+0.5
24,585	+				-0.5
24,585	+				-0.3
24,585	+				+0.2
24,586	-				-1.1
24,586	-				-0.1
24,586	-				+0.3