Strain Fitness in Variovorax sp. SCN45 around GFF7146

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
11,370	+				+1.2
11,370	+				-0.9
11,371	-				-1.2
11,373	+				+0.2
11,373	+				+0.6
11,373	+				-0.5
11,373	+				+0.6
11,373	+				+0.3
11,373	+				+0.4
11,373	+				+0.4
11,373	+				-1.1
11,373	+				-0.3
11,373	+				-0.7
11,373	+				-0.9
11,373	+				-0.7
11,373	+				-0.6
11,373	+				+0.7
11,373	+				-0.1
11,373	+				-0.5
11,373	+				+1.0
11,373	+				-0.1
11,373	+				-0.9
11,373	+				-0.7
11,373	+				-0.3
11,373	+				+0.6
11,373	+				+0.1
11,373	+				+1.9
11,373	+				+0.3
11,373	+				-0.9
11,373	+				+0.2
11,373	+				-0.3
11,373	+				-0.2
11,373	+				-0.1
11,373	+				-0.5
11,373	+				+0.4
11,373	+				-0.6
11,373	+				-0.7
11,373	+				+0.3
11,374	-				+0.2
11,374	-				+0.2
11,374	-				-0.0
11,374	-				-0.1
11,374	-				-0.4
11,374	-				+0.6
11,374	-				-0.6
11,374	-				-3.3
11,374	-				+0.6
11,374	-				-0.4
11,374	-				-0.6
11,374	-				+0.2
11,374	-				-0.9
11,374	-				-0.9
11,374	-				-0.1
11,374	-				+0.2
11,374	-				-0.4
11,374	-				-0.3
11,374	-				-0.2
11,374	-				-0.8
11,374	-				+0.2
11,374	-				-0.0
11,374	-				+0.1
11,374	-				-0.5
11,374	-				-0.4
11,374	-				-0.7
11,374	-				-0.3
11,374	-				-0.9
11,374	-				+0.2
11,374	-				+0.2
11,377	+				+0.7
11,377	+				+2.4
11,377	+				-0.4
11,377	+				-0.5
11,377	+				+0.3
11,378	-				-0.6
11,390	+				+0.5
11,390	+				-1.1
11,390	+				+0.2
11,390	+				-0.1
11,390	+				+0.9
11,390	+				+0.7
11,390	+				-0.3
11,390	+				-0.0
11,390	+				-0.4
11,390	+				+0.4
11,391	-				-0.0
11,391	-				-0.9
11,391	-				-0.1
11,391	-				-0.2
11,391	-				-0.3
11,391	-				-0.8
11,391	-				-0.7
11,391	-				-0.6
11,391	-				-0.2
11,391	-				-0.3
11,391	-				-0.6
11,391	-				-0.2
11,426	+				-0.1
11,426	+				-1.0
11,426	+				+0.2
11,426	+				-0.5
11,426	+				+1.5
11,426	+				-0.5
11,426	+				-0.1
11,426	+				-1.2
11,426	+				-1.2
11,426	+				-0.2
11,426	+				-0.5
11,426	+				-0.1
11,427	-				+0.0
11,427	-				+0.5
11,427	-				-0.6
11,427	-				+0.3
11,427	-				-0.0
11,427	-				-0.0
11,427	-				+0.3
11,427	-				-0.7
11,540	+		GFF7145	0.22	+0.9
11,540	+		GFF7145	0.22	-0.4
11,540	+		GFF7145	0.22	-0.8
11,540	+		GFF7145	0.22	-0.7
11,540	+		GFF7145	0.22	-0.9
11,540	+		GFF7145	0.22	+0.4
11,541	-		GFF7145	0.22	-0.9
11,541	-		GFF7145	0.22	-0.7
11,541	-		GFF7145	0.22	-0.5
11,541	-		GFF7145	0.22	-0.4
11,541	-		GFF7145	0.22	-0.5
11,541	-		GFF7145	0.22	-0.6
11,541	-		GFF7145	0.22	+0.3
11,546	+		GFF7145	0.22	-2.5
11,547	-		GFF7145	0.23	-0.2
11,547	-		GFF7145	0.23	-2.5
11,654	+		GFF7145	0.38	-0.7
11,654	+		GFF7145	0.38	+0.3
11,654	+		GFF7145	0.38	-0.2
11,654	+		GFF7145	0.38	-0.5
11,654	+		GFF7145	0.38	-0.5
11,654	+		GFF7145	0.38	-0.4
11,654	+		GFF7145	0.38	+0.9
11,654	+		GFF7145	0.38	-0.9
11,654	+		GFF7145	0.38	+0.3
11,654	+		GFF7145	0.38	+0.1
11,654	+		GFF7145	0.38	-0.1
11,654	+		GFF7145	0.38	-0.6
11,654	+		GFF7145	0.38	-0.5
11,654	+		GFF7145	0.38	-0.6
11,654	+		GFF7145	0.38	-0.2
11,654	+		GFF7145	0.38	+0.4
11,654	+		GFF7145	0.38	-1.7
11,654	+		GFF7145	0.38	-0.5
11,655	-		GFF7145	0.38	+1.9
11,655	-		GFF7145	0.38	+0.2
11,655	-		GFF7145	0.38	+0.6
11,655	-		GFF7145	0.38	+1.9
11,655	-		GFF7145	0.38	-0.3
11,655	-		GFF7145	0.38	+0.2
11,655	-		GFF7145	0.38	-1.7
11,655	-		GFF7145	0.38	-0.4
11,655	-		GFF7145	0.38	-0.6
11,655	-		GFF7145	0.38	-1.0
11,996	+		GFF7145	0.87	-0.5
11,996	+		GFF7145	0.87	-0.5
11,996	+		GFF7145	0.87	+0.5
11,996	+		GFF7145	0.87	-2.5
11,997	-		GFF7145	0.87	-1.7
11,997	-		GFF7145	0.87	+0.2
12,426	+		GFF7146	0.26	-0.9
12,426	+		GFF7146	0.26	-0.5
12,426	+		GFF7146	0.26	+0.3
12,426	+		GFF7146	0.26	-1.6
12,426	+		GFF7146	0.26	-0.6
12,426	+		GFF7146	0.26	+0.3
12,427	-		GFF7146	0.26	+0.2
12,427	-		GFF7146	0.26	-1.6
12,427	-		GFF7146	0.26	+1.1
12,427	-		GFF7146	0.26	-0.9
12,427	-		GFF7146	0.26	-0.1
12,427	-		GFF7146	0.26	+0.0
12,427	-		GFF7146	0.26	-1.0
12,427	-		GFF7146	0.26	+0.5
12,427	-		GFF7146	0.26	-0.1
12,532	+		GFF7146	0.34	-0.4
12,532	+		GFF7146	0.34	+0.3
12,532	+		GFF7146	0.34	+0.2
12,532	+		GFF7146	0.34	-0.2
12,532	+		GFF7146	0.34	+0.8
12,532	+		GFF7146	0.34	-0.9
12,532	+		GFF7146	0.34	+1.4
12,532	+		GFF7146	0.34	+0.2
12,532	+		GFF7146	0.34	+0.3
12,533	-		GFF7146	0.34	+1.7
12,533	-		GFF7146	0.34	-0.2
12,533	-		GFF7146	0.34	+0.9
12,533	-		GFF7146	0.34	+0.5
12,533	-		GFF7146	0.34	+0.5
12,533	-		GFF7146	0.34	+0.4
12,533	-		GFF7146	0.34	-0.3
12,533	-		GFF7146	0.34	-0.2
13,886	+		GFF7148	0.23	-1.5
13,886	+		GFF7148	0.23	-0.7
13,887	-		GFF7148	0.23	-0.7
13,887	-		GFF7148	0.23	-0.5
14,048	+		GFF7148	0.37	+0.3
14,048	+		GFF7148	0.37	+0.0
14,048	+		GFF7148	0.37	+0.7
14,048	+		GFF7148	0.37	-0.3
14,048	+		GFF7148	0.37	+0.3
14,049	-		GFF7148	0.37	+0.2
14,049	-		GFF7148	0.37	+0.6
14,049	-		GFF7148	0.37	-1.4
14,312	+		GFF7148	0.61	+0.9
14,312	+		GFF7148	0.61	+1.3
14,312	+		GFF7148	0.61	+0.1
14,312	+		GFF7148	0.61	-0.7
14,312	+		GFF7148	0.61	+0.3
14,312	+		GFF7148	0.61	+0.4
14,312	+		GFF7148	0.61	-0.7
14,312	+		GFF7148	0.61	-0.3
14,312	+		GFF7148	0.61	-0.3
14,312	+		GFF7148	0.61	-0.5
14,313	-		GFF7148	0.61	-0.8
14,313	-		GFF7148	0.61	-0.7
14,313	-		GFF7148	0.61	+0.6
14,313	-		GFF7148	0.61	-0.3