Experiment: Community=Locust bean gum; Passage=1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7128 and GFF7129 are separated by 113 nucleotides GFF7129 and GFF7130 overlap by 4 nucleotides GFF7130 and GFF7131 are separated by 199 nucleotides
GFF7128 - Mobile element protein, at 44,683 to 45,138
GFF7128
GFF7129 - Mobile element protein, at 45,252 to 46,085
GFF7129
GFF7130 - Mobile element protein, at 46,082 to 46,387
GFF7130
GFF7131 - no description, at 46,587 to 46,970
GFF7131
Position (kb) 46
47 Strain fitness (log2 ratio) -2
-1
0
1
2 at 45.234 kb on + strand at 45.235 kb on - strand at 45.253 kb on + strand at 45.292 kb on + strand at 45.292 kb on + strand at 45.293 kb on - strand at 45.347 kb on - strand, within GFF7129 at 45.358 kb on + strand, within GFF7129 at 45.359 kb on - strand, within GFF7129 at 45.409 kb on + strand, within GFF7129 at 45.410 kb on - strand, within GFF7129 at 45.410 kb on - strand, within GFF7129 at 45.421 kb on + strand, within GFF7129 at 45.691 kb on + strand, within GFF7129 at 45.691 kb on + strand, within GFF7129 at 45.692 kb on - strand, within GFF7129 at 45.692 kb on - strand, within GFF7129 at 45.692 kb on - strand, within GFF7129 at 45.718 kb on + strand, within GFF7129 at 45.718 kb on + strand, within GFF7129 at 45.718 kb on + strand, within GFF7129 at 45.719 kb on - strand, within GFF7129 at 45.719 kb on - strand, within GFF7129 at 45.719 kb on - strand, within GFF7129 at 45.719 kb on - strand, within GFF7129 at 45.778 kb on + strand, within GFF7129 at 45.784 kb on + strand, within GFF7129 at 45.785 kb on - strand, within GFF7129 at 45.785 kb on - strand, within GFF7129 at 45.785 kb on - strand, within GFF7129 at 45.785 kb on - strand, within GFF7129 at 45.830 kb on - strand, within GFF7129 at 46.009 kb on + strand at 46.012 kb on + strand at 46.012 kb on + strand at 46.013 kb on - strand at 46.013 kb on - strand at 46.241 kb on + strand, within GFF7130 at 46.241 kb on + strand, within GFF7130 at 46.242 kb on - strand, within GFF7130 at 46.242 kb on - strand, within GFF7130 at 46.242 kb on - strand, within GFF7130 at 46.242 kb on - strand, within GFF7130 at 46.713 kb on + strand, within GFF7131 at 46.713 kb on + strand, within GFF7131 at 46.717 kb on - strand, within GFF7131 at 46.717 kb on - strand, within GFF7131 at 46.866 kb on + strand, within GFF7131 at 46.866 kb on + strand, within GFF7131 at 46.867 kb on - strand, within GFF7131 at 46.867 kb on - strand, within GFF7131 at 46.987 kb on + strand at 46.987 kb on + strand at 46.987 kb on + strand at 46.988 kb on - strand at 46.988 kb on - strand at 47.023 kb on + strand at 47.024 kb on - strand at 47.132 kb on + strand at 47.133 kb on - strand at 47.266 kb on - strand at 47.266 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Community=Locust bean gum; Passage=1 remove 45,234 + -1.0 45,235 - +0.1 45,253 + -0.2 45,292 + -0.6 45,292 + -0.2 45,293 - +0.6 45,347 - GFF7129 0.11 -1.1 45,358 + GFF7129 0.13 -0.7 45,359 - GFF7129 0.13 -1.2 45,409 + GFF7129 0.19 -0.9 45,410 - GFF7129 0.19 -1.7 45,410 - GFF7129 0.19 +0.1 45,421 + GFF7129 0.20 -0.4 45,691 + GFF7129 0.53 -1.3 45,691 + GFF7129 0.53 -0.6 45,692 - GFF7129 0.53 -0.8 45,692 - GFF7129 0.53 -0.8 45,692 - GFF7129 0.53 +0.6 45,718 + GFF7129 0.56 +0.5 45,718 + GFF7129 0.56 +1.0 45,718 + GFF7129 0.56 +0.1 45,719 - GFF7129 0.56 -0.2 45,719 - GFF7129 0.56 -1.1 45,719 - GFF7129 0.56 +0.8 45,719 - GFF7129 0.56 -1.4 45,778 + GFF7129 0.63 -0.7 45,784 + GFF7129 0.64 -0.5 45,785 - GFF7129 0.64 -0.9 45,785 - GFF7129 0.64 -0.7 45,785 - GFF7129 0.64 -0.9 45,785 - GFF7129 0.64 -1.0 45,830 - GFF7129 0.69 +0.4 46,009 + +0.4 46,012 + +0.1 46,012 + -0.1 46,013 - -0.2 46,013 - -0.2 46,241 + GFF7130 0.52 -0.5 46,241 + GFF7130 0.52 +0.9 46,242 - GFF7130 0.52 +0.9 46,242 - GFF7130 0.52 +0.3 46,242 - GFF7130 0.52 +0.5 46,242 - GFF7130 0.52 +1.1 46,713 + GFF7131 0.33 -0.8 46,713 + GFF7131 0.33 -0.2 46,717 - GFF7131 0.34 -0.6 46,717 - GFF7131 0.34 +1.6 46,866 + GFF7131 0.73 -0.4 46,866 + GFF7131 0.73 +1.0 46,867 - GFF7131 0.73 -0.9 46,867 - GFF7131 0.73 -0.4 46,987 + -0.1 46,987 + +0.4 46,987 + -0.6 46,988 - +0.7 46,988 - -1.8 47,023 + +0.7 47,024 - +1.9 47,132 + +0.2 47,133 - -1.5 47,266 - +0.3 47,266 - -0.1
Or see this region's nucleotide sequence