Strain Fitness in Variovorax sp. SCN45 around GFF7006

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
21,950	+		GFF7005	0.24	-1.7
22,072	-		GFF7005	0.35	+0.6
22,158	-		GFF7005	0.43	-1.9
22,158	-		GFF7005	0.43	-1.6
22,244	+		GFF7005	0.51	-0.7
22,274	+		GFF7005	0.53	+0.1
22,275	-		GFF7005	0.53	+0.7
22,275	-		GFF7005	0.53	+0.9
22,275	-		GFF7005	0.53	-0.0
22,597	+		GFF7005	0.83	+0.1
22,849	+				+0.9
23,126	-		GFF7006	0.48	-0.9
23,126	-		GFF7006	0.48	-0.4
23,126	-		GFF7006	0.48	-2.8
23,188	+		GFF7006	0.56	-1.6
23,188	+		GFF7006	0.56	-0.2
23,189	-		GFF7006	0.56	-0.5
23,204	+		GFF7006	0.58	+0.7
23,205	-		GFF7006	0.59	+0.7
23,205	-		GFF7006	0.59	-0.3
23,316	+		GFF7006	0.74	-0.1
23,316	+		GFF7006	0.74	-0.1
23,317	-		GFF7006	0.74	-0.6
23,317	-		GFF7006	0.74	-0.5
23,482	+				+0.7
23,483	-				+0.0
23,541	+				+0.1
23,541	+				+0.1
23,542	-				-0.2
23,542	-				-0.8
23,542	-				-1.8
23,542	-				-0.4
23,870	+				+0.4
23,871	-				+0.0
23,909	+				+0.7
23,940	+				-0.9
23,941	-				+0.1
23,941	-				-0.3
24,048	+		GFF7008	0.43	-1.0
24,073	-		GFF7008	0.59	-1.6
24,169	+				-0.3
24,182	-				+0.4
24,251	-				+0.7
24,265	+				+0.1
24,265	+				-0.0
24,265	+				+0.6
24,266	-				-0.3
24,266	-				-0.5
24,350	+				+0.0
24,351	-				+0.0
24,383	+				+1.7
24,383	+				+0.9
24,383	+				+0.6
24,383	+				-0.2
24,383	+				+0.1
24,384	-				-0.6
24,384	-				-0.6