Strain Fitness in Variovorax sp. SCN45 around GFF6961

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
34,296	-		GFF6960	0.34	-0.2
34,359	-		GFF6960	0.39	-1.3
34,499	+		GFF6960	0.49	-0.4
34,500	-		GFF6960	0.49	+0.2
34,551	-		GFF6960	0.52	+1.1
34,562	+		GFF6960	0.53	+1.4
34,563	-		GFF6960	0.53	-0.6
34,563	-		GFF6960	0.53	-0.4
34,862	+		GFF6960	0.74	-0.4
34,883	+		GFF6960	0.75	-0.6
34,884	-		GFF6960	0.76	-0.1
34,961	+		GFF6960	0.81	-1.0
34,962	-		GFF6960	0.81	-0.4
34,962	-		GFF6960	0.81	-1.1
35,000	+		GFF6960	0.84	+0.1
35,000	+		GFF6960	0.84	+0.2
35,000	+		GFF6960	0.84	-0.0
35,553	-		GFF6961	0.33	+0.1
35,553	-		GFF6961	0.33	+1.1
35,667	-		GFF6961	0.46	+0.0
35,816	+		GFF6961	0.62	+0.1
35,871	-		GFF6961	0.68	+1.6
36,131	+				-0.1
36,375	+				+0.2
36,376	-				-0.1
36,528	+		GFF6963	0.29	+0.1
36,528	+		GFF6963	0.29	-0.5
36,600	+		GFF6963	0.41	-0.6
36,750	+		GFF6963	0.64	+0.6
36,768	+		GFF6963	0.67	-0.9
37,087	-				-1.1
37,117	-				-0.6
37,155	+		GFF6964	0.12	-1.0
37,156	-		GFF6964	0.12	-0.8
37,156	-		GFF6964	0.12	-0.7