Strain Fitness in Variovorax sp. SCN45 around GFF6959

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
32,556	+		GFF6957	0.52	+0.7
32,557	-		GFF6957	0.52	+0.4
32,931	+		GFF6957	0.79	+1.1
32,931	+		GFF6957	0.79	+1.7
32,931	+		GFF6957	0.79	-0.2
32,991	+		GFF6957	0.83	-0.7
32,991	+		GFF6957	0.83	+1.0
32,991	+		GFF6957	0.83	+0.8
32,991	+		GFF6957	0.83	-2.1
32,994	+		GFF6957	0.83	-0.1
33,027	+		GFF6957	0.86	-0.5
33,027	+		GFF6957	0.86	+0.7
33,028	-		GFF6957	0.86	+0.1
33,028	-		GFF6957	0.86	+0.4
33,028	-		GFF6957	0.86	+0.2
33,132	+				-0.1
33,132	+				-0.6
33,141	+				-0.9
33,347	+		GFF6958	0.45	+0.7
33,347	+		GFF6958	0.45	-0.1
33,347	+		GFF6958	0.45	+0.6
33,347	+		GFF6958	0.45	+0.6
33,348	-		GFF6958	0.46	+0.9
33,348	-		GFF6958	0.46	-1.3
33,348	-		GFF6958	0.46	+0.1
33,619	+		GFF6959	0.46	+0.9
33,620	-		GFF6959	0.46	-0.5
34,017	-		GFF6960	0.15	-0.1
34,017	-		GFF6960	0.15	-1.0
34,059	-		GFF6960	0.18	-0.3
34,296	-		GFF6960	0.34	-0.2
34,359	-		GFF6960	0.39	-1.3
34,499	+		GFF6960	0.49	-0.4
34,500	-		GFF6960	0.49	+0.2
34,551	-		GFF6960	0.52	+1.1
34,562	+		GFF6960	0.53	+1.4
34,563	-		GFF6960	0.53	-0.6
34,563	-		GFF6960	0.53	-0.4