Strain Fitness in Variovorax sp. SCN45 around GFF6932

Experiment: Community=Locust bean gum; Passage=1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=Locust bean gum; Passage=1
8,821	+				-0.4
8,960	+		GFF6931	0.32	-1.2
8,960	+		GFF6931	0.32	+0.0
8,961	-		GFF6931	0.32	+0.6
8,961	-		GFF6931	0.32	+0.3
9,146	+		GFF6931	0.72	+0.3
9,147	-		GFF6931	0.73	-0.3
9,391	+		GFF6932	0.12	-0.3
9,391	+		GFF6932	0.12	-0.3
9,391	+		GFF6932	0.12	-1.7
9,392	-		GFF6932	0.12	+1.3
9,644	+		GFF6932	0.53	-0.9
10,319	+				+0.8
10,319	+				+0.3
10,319	+				-0.1
10,319	+				+0.7
10,319	+				-0.6
10,320	-				+0.6
10,320	-				+0.1
10,320	-				+0.7
10,320	-				-1.3
10,320	-				+0.5
10,320	-				-1.3
10,451	+		GFF6934	0.31	-1.6
10,451	+		GFF6934	0.31	-0.1
10,452	-		GFF6934	0.31	+0.2
10,452	-		GFF6934	0.31	-1.3
10,452	-		GFF6934	0.31	-0.5
10,836	+				+0.1
10,836	+				-0.7
10,837	-				-0.2
10,837	-				+0.7
10,837	-				-0.0