Experiment: Community=Locust bean gum; Passage=1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6812 and GFF6813 are separated by 81 nucleotides GFF6813 and GFF6814 are separated by 19 nucleotides
GFF6812 - no description, at 57,958 to 59,622
GFF6812
GFF6813 - no description, at 59,704 to 59,955
GFF6813
GFF6814 - NADH dehydrogenase (EC 1.6.99.3), at 59,975 to 61,330
GFF6814
Position (kb) 59
60 Strain fitness (log2 ratio) -1
0
1
2 at 58.987 kb on + strand, within GFF6812 at 58.987 kb on + strand, within GFF6812 at 58.987 kb on + strand, within GFF6812 at 58.987 kb on + strand, within GFF6812 at 58.987 kb on + strand, within GFF6812 at 58.987 kb on + strand, within GFF6812 at 58.987 kb on + strand, within GFF6812 at 58.988 kb on - strand, within GFF6812 at 58.988 kb on - strand, within GFF6812 at 58.988 kb on - strand, within GFF6812 at 58.988 kb on - strand, within GFF6812 at 59.048 kb on + strand, within GFF6812 at 59.048 kb on + strand, within GFF6812 at 59.060 kb on + strand, within GFF6812 at 59.060 kb on - strand, within GFF6812 at 59.132 kb on + strand, within GFF6812 at 59.255 kb on + strand, within GFF6812 at 59.255 kb on + strand, within GFF6812 at 59.255 kb on + strand, within GFF6812 at 59.256 kb on - strand, within GFF6812 at 59.275 kb on + strand, within GFF6812 at 59.405 kb on + strand, within GFF6812 at 59.405 kb on + strand, within GFF6812 at 59.405 kb on + strand, within GFF6812 at 59.405 kb on + strand, within GFF6812 at 59.405 kb on + strand, within GFF6812 at 59.406 kb on - strand, within GFF6812 at 59.406 kb on - strand, within GFF6812 at 59.406 kb on - strand, within GFF6812 at 59.406 kb on - strand, within GFF6812 at 59.421 kb on - strand, within GFF6812 at 59.421 kb on - strand, within GFF6812 at 59.873 kb on + strand, within GFF6813 at 59.873 kb on + strand, within GFF6813 at 59.873 kb on + strand, within GFF6813 at 59.874 kb on - strand, within GFF6813 at 59.874 kb on - strand, within GFF6813 at 60.036 kb on + strand at 60.037 kb on - strand at 60.093 kb on + strand at 60.094 kb on - strand at 60.094 kb on - strand at 60.219 kb on + strand, within GFF6814 at 60.517 kb on + strand, within GFF6814 at 60.528 kb on + strand, within GFF6814
Per-strain Table
Position Strand Gene LocusTag Fraction Community=Locust bean gum; Passage=1 remove 58,987 + GFF6812 0.62 -0.2 58,987 + GFF6812 0.62 -0.1 58,987 + GFF6812 0.62 -0.1 58,987 + GFF6812 0.62 -1.2 58,987 + GFF6812 0.62 -0.9 58,987 + GFF6812 0.62 -0.1 58,987 + GFF6812 0.62 +2.0 58,988 - GFF6812 0.62 -0.1 58,988 - GFF6812 0.62 -0.2 58,988 - GFF6812 0.62 -0.3 58,988 - GFF6812 0.62 -1.4 59,048 + GFF6812 0.65 +0.4 59,048 + GFF6812 0.65 -0.3 59,060 + GFF6812 0.66 -0.5 59,060 - GFF6812 0.66 -0.2 59,132 + GFF6812 0.71 -0.3 59,255 + GFF6812 0.78 -0.2 59,255 + GFF6812 0.78 -0.4 59,255 + GFF6812 0.78 -0.2 59,256 - GFF6812 0.78 +0.2 59,275 + GFF6812 0.79 -0.6 59,405 + GFF6812 0.87 +0.4 59,405 + GFF6812 0.87 +0.1 59,405 + GFF6812 0.87 +0.2 59,405 + GFF6812 0.87 -0.3 59,405 + GFF6812 0.87 +0.3 59,406 - GFF6812 0.87 -0.6 59,406 - GFF6812 0.87 -1.3 59,406 - GFF6812 0.87 +0.5 59,406 - GFF6812 0.87 +0.4 59,421 - GFF6812 0.88 +0.2 59,421 - GFF6812 0.88 +0.2 59,873 + GFF6813 0.67 -0.0 59,873 + GFF6813 0.67 +1.4 59,873 + GFF6813 0.67 -1.0 59,874 - GFF6813 0.67 -0.9 59,874 - GFF6813 0.67 +0.9 60,036 + +0.3 60,037 - -0.5 60,093 + -1.6 60,094 - -1.0 60,094 - -0.2 60,219 + GFF6814 0.18 -0.3 60,517 + GFF6814 0.40 -0.1 60,528 + GFF6814 0.41 -0.4
Or see this region's nucleotide sequence